RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CTHRC1Q96CG8 243 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 CMTM5Q96DZ9 223 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 THOC3Q96J01 351 aaKnown RBP14.26□□□□□ -0.13
LSM1-203ENST00000520755 PELOQ9BRX2 385 aaKnown RBP14.26□□□□□ -0.13
LSM1-203ENST00000520755 NEUROD4Q9HD90 331 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 TAS2R9Q9NYW1 312 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 ZNF639Q9UID6 485 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 A0A096LPI6 279 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 RFXANKO14593 260 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 CPSF4O95639 269 aaKnown RBP14.25□□□□□ -0.13
LSM1-203ENST00000520755 CBX7O95931 251 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 GSNP06396 782 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 FAM87AP0C7U9 286 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 ICAM2P13598 275 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 S1PR1P21453 382 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 GALNSP34059 522 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 MPIP34949 423 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 TRMT12Q53H54 448 aaKnown RBP14.25□□□□□ -0.13
LSM1-203ENST00000520755 C6orf10Q5SRN2 563 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 PLAG1Q6DJT9 500 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 DHDDSQ86SQ9 333 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 GALNT12Q8IXK2 581 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 ZNF321PQ8N8H1 164 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 NFAM1Q8NET5 270 aaPredicted RBP14.25□□□□□ -0.13
LSM1-203ENST00000520755 FDCSPQ8NFU4 85 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 OR5AK3PQ8NH89 298 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 OR14A16Q8NHC5 309 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 DAZLQ92904 295 aaKnown RBP14.25□□□□□ -0.13
LSM1-203ENST00000520755 ELP4Q96EB1 424 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 ITCHQ96J02 903 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 PANX1Q96RD7 426 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 SLC39A3Q9BRY0 314 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 OR8D2Q9GZM6 311 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 RMND5AQ9H871 391 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 GPR83Q9NYM4 423 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
LSM1-203ENST00000520755 CACNA1BQ00975 2339 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 PLOD2O00469 737 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 DYRK3O43781 588 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 PSMG1O95456 288 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 IGKV3-11P04433 115 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 SERPINA7P05543 415 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 IFI6P09912 130 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 ITGAMP11215 1152 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 TRPC1P48995 793 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 NUDT2P50583 147 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 LRRC74AQ0VAA2 488 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 MAP4K2Q12851 820 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 STX5Q13190 355 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 EXOSC7Q15024 291 aaKnown RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 TRMT5Q32P41 509 aaKnown RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 C8orf82Q6P1X6 216 aaPredicted RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 TMEM64Q6YI46 380 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 OR2L13Q8N349 312 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 VWA5B2Q8N398 1253 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 KIF2BQ8N4N8 673 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 VPS37AQ8NEZ2 397 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 B3GNT7Q8NFL0 401 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 M1APQ8TC57 530 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 BRIX1Q8TDN6 353 aaKnown RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 ZNF721Q8TF20 911 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 RIT1Q92963 219 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 NCLNQ969V3 563 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 FAM120BQ96EK7 910 aaKnown RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 AURKBQ96GD4 344 aaPredicted RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 NSL1Q96IY1 281 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 CNPPD1Q9BV87 410 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 TRIM8Q9BZR9 551 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 LHPPQ9H008 270 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 IL1RL2Q9HB29 575 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 MMP25Q9NPA2 562 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 NTMQ9P121 344 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 ZNF223Q9UK11 482 aaPredicted RBP14.24□□□□□ -0.13
LSM1-203ENST00000520755 ERVK-19Q9WJR5 959 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 PCDHB14Q9Y5E9 798 aa14.24□□□□□ -0.13
LSM1-203ENST00000520755 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 A8MUI8 341 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 MKRN2OSH3BPM6 223 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 UPK1AO00322 258 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 AIM2O14862 343 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 PLOD3O60568 738 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 NME6O75414 186 aaPredicted RBP14.23□□□□□ -0.13
LSM1-203ENST00000520755 ZCCHC18P0CG32 403 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 SSTR4P31391 388 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 GPC1P35052 558 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 SOAT1P35610 550 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 GPR143P51810 404 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 AP2B1P63010 937 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 FUT7Q11130 342 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 BNIP1Q12981 228 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 KCNAB2Q13303 367 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 NFYCQ13952 458 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 SELPLGQ14242 412 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 CAPRIN1Q14444 709 aaKnown RBP14.23□□□□□ -0.13
LSM1-203ENST00000520755 ZNF267Q14586 743 aaPredicted RBP14.23□□□□□ -0.13
LSM1-203ENST00000520755 MYBPC3Q14896 1274 aa14.23□□□□□ -0.13
LSM1-203ENST00000520755 MMEL1Q495T6 779 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms