RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TBXA2RP21731 343 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 CNTFP26441 200 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 ABCD3P28288 659 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 MAGEA3P43357 314 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 SLAMF1Q13291 335 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 BIKQ13323 160 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 DOC2AQ14183 400 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 NNATQ16517 81 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 AAGABQ6PD74 315 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 CHMP1BQ7LBR1 199 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 WFDC8Q8IUA0 241 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 SNX31Q8N9S9 440 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 ZNF610Q8N9Z0 462 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 TANKQ92844 425 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 RHBDF1Q96CC6 855 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 PTCD3Q96EY7 689 aaKnown RBP9.47□□□□□ -0.89
CLDND1-231ENST00000515620 PDLIM5Q96HC4 596 aaKnown RBP9.47□□□□□ -0.89
CLDND1-231ENST00000515620 NODALQ96S42 347 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 TMEM204Q9BSN7 226 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 DESI2Q9BSY9 194 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 LRTM1Q9HBL6 345 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 GPRC5BQ9NZH0 403 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 VWA7Q9Y334 891 aa9.47□□□□□ -0.89
CLDND1-231ENST00000515620 GLOD5A6NK44 160 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 WASHC1A8K0Z3 465 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 EMC8O43402 210 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 NDUFS7O75251 213 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PPM1BO75688 479 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 CBR3O75828 277 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 GPR75O95800 540 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 TGFB1P01137 390 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 FGGP02679 453 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 RHOXF2BP0C7M4 288 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 CD8BP10966 210 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PGAM1P18669 254 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 TLX1P31314 330 aaPredicted RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 GMPRP36959 345 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PTGDSP41222 190 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 HNRNPH2P55795 449 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 TSNQ15631 228 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 TMEM35AQ53FP2 167 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 FBXO48Q5FWF7 155 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 ALKBH2Q6NS38 261 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 FAM45BPQ6NSW5 357 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 SLC30A6Q6NXT4 461 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 DNM1P46Q6ZS02 220 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 MILR1Q7Z6M3 343 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 GPR180Q86V85 440 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 CNTN4Q8IWV2 1026 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 UBQLNLQ8IYU4 475 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 WDSUB1Q8N9V3 476 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 MCUQ8NE86 351 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 FAM45AQ8TCE6 357 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 ZNF473Q8WTR7 871 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 ROBO4Q8WZ75 1007 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 FIG4Q92562 907 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 ADIPOR1Q96A54 375 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 REPS1Q96D71 796 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 SIGLEC10Q96LC7 697 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 TMEM79Q9BSE2 394 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 EFCAB11Q9BUY7 163 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 CAPS2Q9BXY5 557 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 NXF5Q9H1B4 397 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 DNAJC11Q9NVH1 559 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 MS4A12Q9NXJ0 267 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 EHD3Q9NZN3 535 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 LPAR3Q9UBY5 353 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PHF11Q9UIL8 331 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PTBP2Q9UKA9 531 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 PROCRQ9UNN8 238 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 EXO1Q9UQ84 846 aaKnown RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 LIPT1Q9Y234 373 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 ZKSCAN5Q9Y2L8 839 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 MAGED1Q9Y5V3 778 aaPredicted RBP9.46□□□□□ -0.9
CLDND1-231ENST00000515620 EXPH5Q8NEV8 1989 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 MEGF8Q7Z7M0 2845 aa9.46□□□□□ -0.9
CLDND1-231ENST00000515620 UQCRHLA0A096LP55 91 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 A0A1W2PS29 197 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 PRAMEF25A6NGN4 478 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 SPRY1O43609 319 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-231ENST00000515620 KRT14P02533 472 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 PCNAP12004 261 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 PPP3CBP16298 524 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 SRD5A2P31213 254 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 BUD31P41223 144 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-231ENST00000515620 RAP1GDS1P52306 607 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 CASP9P55211 416 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 FAPQ12884 760 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 ZNF460Q14592 562 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 PDK4Q16654 411 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 HIST2H2ACQ16777 129 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-231ENST00000515620 TMEM249Q2WGJ8 235 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 PAGE2BQ5JRK9 111 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 KHDRBS2Q5VWX1 349 aaKnown RBP9.45□□□□□ -0.9
CLDND1-231ENST00000515620 HIST2H2AA3Q6FI13 130 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 OR4C11Q6IEV9 310 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 TMEM81Q6P7N7 255 aa9.45□□□□□ -0.9
CLDND1-231ENST00000515620 ADAMTSL2Q86TH1 951 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms