RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CHCHD2Q9Y6H1 151 aaPredicted RBP11.79□□□□□ -0.52
CLCN3-210ENST00000515420 ANKRD33BA6NCL7 494 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 MYO1GB0I1T2 1018 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 TP53I11O14683 189 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 LSM1O15116 133 aaKnown RBP11.78□□□□□ -0.52
CLCN3-210ENST00000515420 ACOX3O15254 700 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 LRRTM2O43300 516 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 PLOD3O60568 738 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 SLC19A2O60779 497 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 TBX19O60806 448 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 GLSO94925 669 aaPredicted RBP11.78□□□□□ -0.52
CLCN3-210ENST00000515420 CBX7O95931 251 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 CCL3P10147 92 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 SOX18P35713 384 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 CA7P43166 264 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 SERPINB4P48594 390 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 NR0B1P51843 470 aaKnown RBP11.78□□□□□ -0.52
CLCN3-210ENST00000515420 GPR85P60893 370 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 RPP38P78345 283 aaKnown RBP11.78□□□□□ -0.52
CLCN3-210ENST00000515420 C2orf80Q0P641 193 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF628Q5EBL2 1059 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 TBCELQ5QJ74 424 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 SH2D4BQ5SQS7 431 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 MTFR2Q6P444 385 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 FAM111BQ6SJ93 734 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 ZCCHC23Q6ZST2 131 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 FAM47EQ6ZV65 393 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 NUDCD3Q8IVD9 361 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 FAM9CQ8IZT9 166 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 OR2T11Q8NH01 316 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 EXOSC8Q96B26 276 aaKnown RBP11.78□□□□□ -0.52
CLCN3-210ENST00000515420 HSPBAP1Q96EW2 488 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 PPP3R2Q96LZ3 170 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 ZDHHC11Q9H8X9 412 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 IL1RL2Q9HB29 575 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 PFDN4Q9NQP4 134 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 NPFFR2Q9Y5X5 522 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 MYO7BQ6PIF6 2116 aa11.78□□□□□ -0.52
CLCN3-210ENST00000515420 SETXQ7Z333 2677 aaKnown RBP11.77□□□□□ -0.52
CLCN3-210ENST00000515420 DNAJC13O75165 2243 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 A0A087WV62 115 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM114B3SHH9 223 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 SERPINE1P05121 402 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 LINC00032P0C843 101 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 GP1BBP13224 206 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 PCSK2P16519 638 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 DRD5P21918 477 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 GRK2P25098 689 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 MAPK1P28482 360 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 NTSP30990 170 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 PPICP45877 212 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 ASMTP46597 345 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 EMDP50402 254 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 FOXO1Q12778 655 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 LTB4RQ15722 352 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TRMT12Q53H54 448 aaKnown RBP11.77□□□□□ -0.53
CLCN3-210ENST00000515420 CMPK2Q5EBM0 449 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM81Q6P7N7 255 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 PAOXQ6QHF9 649 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TICAM1Q8IUC6 712 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 SPPL2CQ8IUH8 684 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 EID3Q8N140 333 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 FAM13CQ8NE31 585 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 ADCY4Q8NFM4 1077 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 LCORQ96JN0 433 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-210ENST00000515420 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TTTY12Q9BZ98 90 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 TSPAN10Q9H1Z9 355 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-210ENST00000515420 CENPHQ9H3R5 247 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 BCAP29Q9UHQ4 241 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 DTX4Q9Y2E6 619 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 PTGDR2Q9Y5Y4 395 aa11.77□□□□□ -0.53
CLCN3-210ENST00000515420 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 NINQ8N4C6 2090 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 FRG2CA6NGY1 282 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM233B4DJY2 109 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 PLOD2O00469 737 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 TO15178 435 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 HS6ST1O60243 411 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 WISP2O76076 250 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 IGHG3P01860 377 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 ABOP16442 354 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 DDX5P17844 614 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 SDC1P18827 310 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 ABCD3P28288 659 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 ARRB2P32121 409 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 SLC18A1P54219 525 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 PPIAP62937 165 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 RPL38P63173 70 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 MRPS35P82673 323 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms