RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 COQ9O75208 318 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 ANP32DO95626 131 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 CLPSP04118 112 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 HOXB9P17482 250 aaPredicted RBP19.52■□□□□ 0.72
LSM6-207ENST00000515311 UQCRC2P22695 453 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 SSTR4P31391 388 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 SOAT1P35610 550 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 CCT3P49368 545 aaKnown RBP19.52■□□□□ 0.72
LSM6-207ENST00000515311 SLC37A1P57057 533 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 GAB1Q13480 694 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 SPDYE7PQ495Y7 208 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 RNF111Q6ZNA4 994 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 TMEM102Q8N9M5 508 aaPredicted RBP19.52■□□□□ 0.72
LSM6-207ENST00000515311 OR56A1Q8NGH5 318 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 ELP5Q8TE02 316 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 DOK4Q8TEW6 326 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 MS4A4EQ96PG1 132 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 NUDT9Q9BW91 350 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 OR10A5Q9H207 317 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 ZCCHC3Q9NUD5 404 aaKnown RBP19.52■□□□□ 0.72
LSM6-207ENST00000515311 ARL8BQ9NVJ2 186 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 MAP10Q9P2G4 905 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 TAGLN3Q9UI15 199 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 RNF103-CHMP3A0A140T963 221 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 CCT8L1PA6NM43 557 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 SERPINA7P05543 415 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 TMPRSS3P57727 454 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 AIMP2Q13155 320 aaKnown RBP19.51■□□□□ 0.71
LSM6-207ENST00000515311 DUSP8Q13202 625 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 EXOSC7Q15024 291 aaKnown RBP19.51■□□□□ 0.71
LSM6-207ENST00000515311 TRMT5Q32P41 509 aaKnown RBP19.51■□□□□ 0.71
LSM6-207ENST00000515311 DLEU7Q6UYE1 221 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 DNAJC14Q6Y2X3 702 aaPredicted RBP19.51■□□□□ 0.71
LSM6-207ENST00000515311 ZNF621Q6ZSS3 439 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 KBTBD2Q8IY47 623 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 ZNF321PQ8N8H1 164 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 OR52R1Q8NGF1 315 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 OR8K3Q8NH51 312 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 RCN3Q96D15 328 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 ANKRA2Q9H9E1 313 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 EFCAB1Q9HAE3 211 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 SLC6A13Q9NSD5 602 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.51■□□□□ 0.71
LSM6-207ENST00000515311 BCAP29Q9UHQ4 241 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 CFL2Q9Y281 166 aa19.51■□□□□ 0.71
LSM6-207ENST00000515311 TRBV5-3A0A0A0MS03 114 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 K7ENP7 123 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 GSNP06396 782 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 EMDP50402 254 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 CLCN2P51788 898 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 MNAT1P51948 309 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 GABPB1Q06547 395 aaPredicted RBP19.5■□□□□ 0.71
LSM6-207ENST00000515311 Q0VFX4 171 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 NFYCQ13952 458 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 JMJD6Q6NYC1 403 aaPredicted RBP19.5■□□□□ 0.71
LSM6-207ENST00000515311 INO80CQ6PI98 192 aaPredicted RBP19.5■□□□□ 0.71
LSM6-207ENST00000515311 HSDL2Q6YN16 418 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 DHDDSQ86SQ9 333 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 CLEC1AQ8NC01 280 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 SIMC1Q8NDZ2 872 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 NUP43Q8NFH3 380 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 C16orf52Q8NHV5 167 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 ROPN1LQ96C74 230 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 NEURL3Q96EH8 262 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 MAGED4Q96JG8 741 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 NPAS2Q99743 824 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 SLC35A5Q9BS91 424 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 ATP13A2Q9NQ11 1180 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 GID8Q9NWU2 228 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 SLAMF8Q9P0V8 285 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 PRODH2Q9UF12 536 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 ZNF223Q9UK11 482 aaPredicted RBP19.5■□□□□ 0.71
LSM6-207ENST00000515311 PCDHB14Q9Y5E9 798 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 HEMK1Q9Y5R4 338 aaPredicted RBP19.5■□□□□ 0.71
LSM6-207ENST00000515311 GMEB1Q9Y692 573 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 ZFHX4Q86UP3 3567 aa19.5■□□□□ 0.71
LSM6-207ENST00000515311 TRBV11-1A0A0K0K1C0 115 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 ITPKBP27987 946 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 TP53BP2Q13625 1128 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 SAXO2Q658L1 398 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 C6orf89Q6UWU4 347 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 SLC29A4Q7RTT9 530 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 SZRD1Q7Z422 152 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 OR5AK3PQ8NH89 298 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 NSL1Q96IY1 281 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 EPS8L2Q9H6S3 715 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 GPATCH2Q9NW75 528 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 SLC25A37Q9NYZ2 338 aa19.49■□□□□ 0.71
LSM6-207ENST00000515311 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 ARGFXA6NJG6 315 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 AIM2O14862 343 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 ZFAND5O76080 213 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 CBX6O95503 412 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 KRT75O95678 551 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 HMGN2P05204 90 aaKnown RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 ESRRAP11474 423 aaPredicted RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 PPIBP23284 216 aaKnown RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 CHI3L1P36222 383 aaPredicted RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 MAGEA8P43361 318 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 SOX8P57073 446 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms