RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 MGLLQ99685 303 aa14□□□□□ -0.17
NUP54-217ENST00000514987 POLDIP3Q9BY77 421 aaKnown RBP14□□□□□ -0.17
NUP54-217ENST00000514987 ANKRD19PQ9H560 264 aa14□□□□□ -0.17
NUP54-217ENST00000514987 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
NUP54-217ENST00000514987 FBXW2Q9UKT8 454 aa14□□□□□ -0.17
NUP54-217ENST00000514987 FUOMA2VDF0 154 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 ISPDA4D126 451 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 URADA6NGE7 173 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 CCRL2O00421 344 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 TNFRSF10CO14798 259 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 SLC31A1O15431 190 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 SEMA7AO75326 666 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 ENTPD6O75354 484 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 CHRM4P08173 479 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 NR2F6P10588 404 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 ACADMP11310 421 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 SOX6P35712 828 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 SOX9P48436 509 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 BCAP31P51572 246 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 LASP1Q14847 261 aaKnown RBP13.99□□□□□ -0.17
NUP54-217ENST00000514987 OXA1LQ15070 435 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 GPR19Q15760 415 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 MFSD4BQ5TF39 518 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 C1orf94Q6P1W5 598 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 GDPGP1Q6ZNW5 385 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 RBM45Q8IUH3 476 aaKnown RBP13.99□□□□□ -0.17
NUP54-217ENST00000514987 LACC1Q8IV20 430 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 NUP43Q8NFH3 380 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 WDR36Q8NI36 951 aaKnown RBP13.99□□□□□ -0.17
NUP54-217ENST00000514987 ELP4Q96EB1 424 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 RSPO3Q9BXY4 272 aaPredicted RBP13.99□□□□□ -0.17
NUP54-217ENST00000514987 SIAEQ9HAT2 523 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 KCNK12Q9HB15 430 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 C11orf16Q9NQ32 467 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 ANKMY1Q9P2S6 941 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 APOBEC3BQ9UH17 382 aaKnown RBP13.99□□□□□ -0.17
NUP54-217ENST00000514987 KLF15Q9UIH9 416 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 KLHL20Q9Y2M5 609 aa13.99□□□□□ -0.17
NUP54-217ENST00000514987 GLOD5A6NK44 160 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 SNTNA6NMZ2 147 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 M0R3H8 397 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ALPPP05187 535 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 FUT4P22083 530 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 CERS1P27544 350 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 MAT2AP31153 395 aaKnown RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 S100A5P33763 92 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 BUD31P41223 144 aaPredicted RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 LIMK1P53667 647 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 BTN3A2P78410 334 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ZNF45Q02386 682 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 HYAL1Q12794 435 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 PIN1Q13526 163 aaPredicted RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 SHHQ15465 462 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 MED22Q15528 200 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 C18orf63Q68DL7 685 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 TMEM107Q6UX40 140 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ASPGQ86U10 573 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 OR4E2Q8NGC2 313 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 OR4K5Q8NGD3 323 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 GNPDA2Q8TDQ7 276 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ZFPM2Q8WW38 1151 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 SIPA1Q96FS4 1042 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ZNF681Q96N22 645 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 OR7D2Q96RA2 312 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ARHGDIGQ99819 225 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 MND1Q9BWT6 205 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ACTRT3Q9BYD9 372 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 ALOXE3Q9BYJ1 711 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 PBX4Q9BYU1 374 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 PRRG3Q9BZD7 231 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 SRMSQ9H3Y6 488 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 CACYBPQ9HB71 228 aaKnown RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 KLHL28Q9NXS3 571 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 SCHIP1Q9P0W5 487 aaPredicted RBP13.98□□□□□ -0.17
NUP54-217ENST00000514987 NTMQ9P121 344 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 TBC1D29Q9UFV1 150 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 CFL2Q9Y281 166 aa13.98□□□□□ -0.17
NUP54-217ENST00000514987 A0A1W2PQF6 199 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 C4orf51C9J302 202 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 FAM227AF5H4B4 570 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 M0R129 80 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 LINC01565O15544 149 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 KLF8O95600 359 aaPredicted RBP13.97□□□□□ -0.17
NUP54-217ENST00000514987 SCG5P05408 212 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 SLC35G6P0C7Q6 338 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 HSMCR30P0CW71 290 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
NUP54-217ENST00000514987 CDH3P22223 829 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 FEN1P39748 380 aaKnown RBP13.97□□□□□ -0.17
NUP54-217ENST00000514987 PBX2P40425 430 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 PCYT1AP49585 367 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 SMSP52788 366 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 RAB8AP61006 207 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 RELAQ04206 551 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 FUT5Q11128 374 aa13.97□□□□□ -0.17
NUP54-217ENST00000514987 C1DQ13901 141 aaKnown RBP13.97□□□□□ -0.17
NUP54-217ENST00000514987 SUZ12Q15022 739 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms