RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 FAAH2Q6GMR7 532 aa8.82□□□□□ -1
SNF8-211ENST00000512243 FAM71E1Q6IPT2 247 aa8.82□□□□□ -1
SNF8-211ENST00000512243 SPATA21Q7Z572 469 aa8.82□□□□□ -1
SNF8-211ENST00000512243 R3HCC1LQ7Z5L2 792 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 CPLX4Q7Z7G2 160 aa8.82□□□□□ -1
SNF8-211ENST00000512243 SCUBE1Q8IWY4 988 aa8.82□□□□□ -1
SNF8-211ENST00000512243 MMP21Q8N119 569 aa8.82□□□□□ -1
SNF8-211ENST00000512243 TMEM52Q8NDY8 209 aa8.82□□□□□ -1
SNF8-211ENST00000512243 C7orf57Q8NEG2 295 aa8.82□□□□□ -1
SNF8-211ENST00000512243 TANKQ92844 425 aa8.82□□□□□ -1
SNF8-211ENST00000512243 TSLPQ969D9 159 aa8.82□□□□□ -1
SNF8-211ENST00000512243 GFM2Q969S9 779 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 KLHL29Q96CT2 875 aa8.82□□□□□ -1
SNF8-211ENST00000512243 VPS50Q96JG6 964 aa8.82□□□□□ -1
SNF8-211ENST00000512243 SLC45A3Q96JT2 553 aa8.82□□□□□ -1
SNF8-211ENST00000512243 MARK4Q96L34 752 aa8.82□□□□□ -1
SNF8-211ENST00000512243 PTCHD1Q96NR3 888 aa8.82□□□□□ -1
SNF8-211ENST00000512243 CATSPER2Q96P56 530 aa8.82□□□□□ -1
SNF8-211ENST00000512243 CCNL2Q96S94 520 aaPredicted RBP8.82□□□□□ -1
SNF8-211ENST00000512243 DPY30Q9C005 99 aa8.82□□□□□ -1
SNF8-211ENST00000512243 GCM1Q9NP62 436 aa8.82□□□□□ -1
SNF8-211ENST00000512243 PRR13Q9NZ81 148 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ADAM21Q9UKJ8 722 aa8.82□□□□□ -1
SNF8-211ENST00000512243 PSME2Q9UL46 239 aa8.82□□□□□ -1
SNF8-211ENST00000512243 G3BP2Q9UN86 482 aaKnown RBP8.82□□□□□ -1
SNF8-211ENST00000512243 ENTPD4Q9Y227 616 aa8.82□□□□□ -1
SNF8-211ENST00000512243 CELSR3Q9NYQ7 3312 aa8.82□□□□□ -1
SNF8-211ENST00000512243 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SRRM3A6NNA2 597 aaPredicted RBP8.81□□□□□ -1
SNF8-211ENST00000512243 SCAMP2O15127 329 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 PGRMC2O15173 223 aa8.81□□□□□ -1
SNF8-211ENST00000512243 AKAP10O43572 662 aa8.81□□□□□ -1
SNF8-211ENST00000512243 FGF17O60258 216 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SHOX2O60902 331 aaPredicted RBP8.81□□□□□ -1
SNF8-211ENST00000512243 CTNSO60931 367 aa8.81□□□□□ -1
SNF8-211ENST00000512243 LDB3O75112 727 aa8.81□□□□□ -1
SNF8-211ENST00000512243 CAPNS1P04632 268 aa8.81□□□□□ -1
SNF8-211ENST00000512243 GSNP06396 782 aa8.81□□□□□ -1
SNF8-211ENST00000512243 MAOAP21397 527 aa8.81□□□□□ -1
SNF8-211ENST00000512243 VAMP1P23763 118 aa8.81□□□□□ -1
SNF8-211ENST00000512243 NTSP30990 170 aa8.81□□□□□ -1
SNF8-211ENST00000512243 EIF2S3P41091 472 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 CLNS1AP54105 237 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 DIO3P55073 304 aa8.81□□□□□ -1
SNF8-211ENST00000512243 IRX1P78414 480 aaPredicted RBP8.81□□□□□ -1
SNF8-211ENST00000512243 BTG2P78543 158 aa8.81□□□□□ -1
SNF8-211ENST00000512243 PLIN5Q00G26 463 aa8.81□□□□□ -1
SNF8-211ENST00000512243 ID2Q02363 134 aa8.81□□□□□ -1
SNF8-211ENST00000512243 FOLH1Q04609 750 aa8.81□□□□□ -1
SNF8-211ENST00000512243 EEF1A2Q05639 463 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 IL10RAQ13651 578 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SERTAD2Q14140 314 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SSPNQ14714 243 aa8.81□□□□□ -1
SNF8-211ENST00000512243 PTGR1Q14914 329 aa8.81□□□□□ -1
SNF8-211ENST00000512243 NSDHLQ15738 373 aa8.81□□□□□ -1
SNF8-211ENST00000512243 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 C6orf163Q5TEZ5 329 aa8.81□□□□□ -1
SNF8-211ENST00000512243 TMEM198Q66K66 360 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SLC48A1Q6P1K1 146 aa8.81□□□□□ -1
SNF8-211ENST00000512243 PROSER1Q86XN7 944 aa8.81□□□□□ -1
SNF8-211ENST00000512243 SAMD14Q8IZD0 417 aaPredicted RBP8.81□□□□□ -1
SNF8-211ENST00000512243 PLPP5Q8NEB5 264 aa8.81□□□□□ -1
SNF8-211ENST00000512243 OR4K14Q8NGD5 310 aa8.81□□□□□ -1
SNF8-211ENST00000512243 DNAJB14Q8TBM8 379 aa8.81□□□□□ -1
SNF8-211ENST00000512243 C10orf82Q8WW14 230 aa8.81□□□□□ -1
SNF8-211ENST00000512243 EXOSC8Q96B26 276 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 EGLN2Q96KS0 407 aa8.81□□□□□ -1
SNF8-211ENST00000512243 IP6K3Q96PC2 410 aa8.81□□□□□ -1
SNF8-211ENST00000512243 DGAT2Q96PD7 388 aa8.81□□□□□ -1
SNF8-211ENST00000512243 ZBTB18Q99592 522 aa8.81□□□□□ -1
SNF8-211ENST00000512243 ELAC2Q9BQ52 826 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 PELOQ9BRX2 385 aaKnown RBP8.81□□□□□ -1
SNF8-211ENST00000512243 BRINP2Q9C0B6 783 aa8.81□□□□□ -1
SNF8-211ENST00000512243 EPN3Q9H201 632 aa8.81□□□□□ -1
SNF8-211ENST00000512243 REEP4Q9H6H4 257 aa8.81□□□□□ -1
SNF8-211ENST00000512243 KCNK13Q9HB14 408 aa8.81□□□□□ -1
SNF8-211ENST00000512243 GP6Q9HCN6 339 aa8.81□□□□□ -1
SNF8-211ENST00000512243 NECTIN3Q9NQS3 549 aa8.81□□□□□ -1
SNF8-211ENST00000512243 EHD3Q9NZN3 535 aa8.81□□□□□ -1
SNF8-211ENST00000512243 C5AR2Q9P296 337 aa8.81□□□□□ -1
SNF8-211ENST00000512243 HEY2Q9UBP5 337 aa8.81□□□□□ -1
SNF8-211ENST00000512243 BAIAP2L1Q9UHR4 511 aa8.81□□□□□ -1
SNF8-211ENST00000512243 UTS2RQ9UKP6 389 aa8.81□□□□□ -1
SNF8-211ENST00000512243 ZNF780BQ9Y6R6 833 aa8.81□□□□□ -1
SNF8-211ENST00000512243 IGKV3D-11A0A0A0MRZ8 115 aa8.8□□□□□ -1
SNF8-211ENST00000512243 TCRBV16S1A1N1A0A5B0 115 aa8.8□□□□□ -1
SNF8-211ENST00000512243 OR2W5A6NFC9 320 aa8.8□□□□□ -1
SNF8-211ENST00000512243 PDPK1O15530 556 aa8.8□□□□□ -1
SNF8-211ENST00000512243 OR10H2O60403 315 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ERAL1O75616 437 aaKnown RBP8.8□□□□□ -1
SNF8-211ENST00000512243 GPR75O95800 540 aa8.8□□□□□ -1
SNF8-211ENST00000512243 IFNA16P05015 189 aa8.8□□□□□ -1
SNF8-211ENST00000512243 PRKAR1AP10644 381 aa8.8□□□□□ -1
SNF8-211ENST00000512243 COX7A2P14406 83 aa8.8□□□□□ -1
SNF8-211ENST00000512243 NCF2P19878 526 aaPredicted RBP8.8□□□□□ -1
SNF8-211ENST00000512243 PRPS1L1P21108 318 aa8.8□□□□□ -1
SNF8-211ENST00000512243 MMP11P24347 488 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ATP4BP51164 291 aa8.8□□□□□ -1
SNF8-211ENST00000512243 EFNA3P52797 238 aa8.8□□□□□ -1
SNF8-211ENST00000512243 UCNP55089 124 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms