RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-209	ENST00000512130	PDZK1IP1	Q13113	114 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	ACSF3	Q4G176	576 aa	Predicted RBP	4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	AFTPH	Q6ULP2	937 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	STXBP4	Q6ZWJ1	553 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	MOB2	Q70IA6	237 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	BCORP1	Q8N888	145 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	MINDY2	Q8NBR6	621 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZNF397	Q8NF99	534 aa	Predicted RBP	4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	SELENOM	Q8WWX9	145 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	CCDC51	Q96ER9	411 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZNF597	Q96LX8	424 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	PSMB7	Q99436	277 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	TRIM15	Q9C019	465 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	ACTR8	Q9H981	624 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	NRN1	Q9NPD7	142 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	YAE1D1	Q9NRH1	226 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	IKZF3	Q9UKT9	509 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	EMCN	Q9ULC0	261 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	AP1M2	Q9Y6Q5	423 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130		U3KQV3	271 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130	ABCC4	O15439	1325 aa		4.65	□□□□□ -1.67
LINC01088-209	ENST00000512130		A0A0A6YYD4	124 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130		F8WDY8	70 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130		K7EQG2	157 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	CLDN3	O15551	220 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	STK17B	O94768	372 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	HEXB	P07686	556 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	SLC35G4	P0C7Q5	338 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZCCHC18	P0CG32	403 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	FUT1	P19526	365 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	PTPN6	P29350	595 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ATP4B	P51164	291 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	SGSH	P51688	502 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	IL9R	Q01113	521 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ACY1	Q03154	408 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	HSF2	Q03933	536 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZSWIM7	Q19AV6	140 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	DNAJC21	Q5F1R6	531 aa	Known RBP	4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	TMUB2	Q71RG4	321 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	RPAIN	Q86UA6	219 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZBTB44	Q8NCP5	570 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	OR52B4	Q8NGK2	314 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZNF599	Q96NL3	588 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	PNN	Q9H307	717 aa	Known RBP	4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	GDAP2	Q9NXN4	497 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	CTSZ	Q9UBR2	303 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	FZR1	Q9UM11	496 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	PRSS21	Q9Y6M0	314 aa		4.64	□□□□□ -1.67
LINC01088-209	ENST00000512130	IGHV3OR16-10	A0A075B7F0	116 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	IGKV3D-15	A0A087WSY6	115 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130		E9PMD0	336 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130		H3BTX0	84 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	SGK494	L7N484	410 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	PDXK	O00764	312 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	NDC80	O14777	642 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	VPS26A	O75436	327 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	NUDT14	O95848	222 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	ECD	O95905	644 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	IFNB1	P01574	187 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	TNNI3	P19429	210 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	IL4R	P24394	825 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	LMO2	P25791	158 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	MAT2A	P31153	395 aa	Known RBP	4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	ITPK1	Q13572	414 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	RAPSN	Q13702	412 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	SIX1	Q15475	284 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	LRIT3	Q3SXY7	679 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	REP15	Q6BDI9	236 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	ABRAXAS1	Q6UWZ7	409 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	APOOL	Q6UXV4	268 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	PAQR9	Q6ZVX9	377 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	PHC2	Q8IXK0	858 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	SSC4D	Q8WTU2	575 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	APOO	Q9BUR5	198 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	GPR174	Q9BXC1	333 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	RNF41	Q9H4P4	317 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	LIN28A	Q9H9Z2	209 aa	Known RBP	4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	IL1RL2	Q9HB29	575 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	ATXN10	Q9UBB4	475 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	P2RX2	Q9UBL9	471 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	SH3BGRL2	Q9UJC5	107 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	CHMP2B	Q9UQN3	213 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130	KLHDC2	Q9Y2U9	406 aa		4.63	□□□□□ -1.67
LINC01088-209	ENST00000512130		A0A087WZY1	265 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	TEX48	A0A1B0GUV7	120 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130		E9PQ18	207 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	NDUFA7	O95182	113 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	GUCA1C	O95843	209 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	AK1	P00568	194 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	TRIM23	P36406	574 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	RAG2	P55895	527 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	ANKRD55	Q3KP44	614 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	WDR25	Q64LD2	544 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	EMB	Q6PCB8	327 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	ZNF497	Q6ZNH5	498 aa		4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	TSEN54	Q7Z6J9	526 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	CCDC71	Q8IV32	467 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-209	ENST00000512130	C4orf32	Q8N8J7	132 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms