RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TMEM104Q8NE00 496 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PROKR2Q8NFJ6 384 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR5T3Q8NGG3 340 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR4C15Q8NGM1 316 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR10J5Q8NHC4 309 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 NANPQ8TBE9 248 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 NSMAFQ92636 917 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 GTF2H4Q92759 462 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 EME1Q96AY2 570 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ASB9Q96DX5 294 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CMTM5Q96DZ9 223 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PPP1R16AQ96I34 528 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 C10orf90Q96M02 699 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PGLYRP2Q96PD5 576 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 GPA33Q99795 319 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ABHD6Q9BV23 337 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 FNDC11Q9BVV2 318 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 DGCR6LQ9BY27 220 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ASB7Q9H672 318 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 EPHX3Q9H6B9 360 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 LMAN1LQ9HAT1 526 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 HHATLQ9HCP6 504 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OSER1Q9NX31 292 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 VWA7Q9Y334 891 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 GMPPBQ9Y5P6 360 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 WIF1Q9Y5W5 379 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACTL7AQ9Y615 435 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TDRD15B5MCY1 1934 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 A0A087WWL8 130 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 A0A1W2PR77 199 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 EFCAB10A6NFE3 127 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR2AT4A6NND4 320 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 NPIPB8E9PQR5 432 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 H7C0C1 242 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 M0QYT0 321 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 HSPA12AO43301 675 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 UPK3AO75631 287 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PAEPP09466 180 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR4Q2P0C623 313 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ETS2P15036 469 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 XRCC1P18887 633 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TACR2P21452 398 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 S1PR1P21453 382 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 KLRC2P26717 231 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TYK2P29597 1187 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC6A6P31641 620 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 STX2P32856 288 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ADRA1AP35348 466 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 GSSP48637 474 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 HTR6P50406 440 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PLK1P53350 603 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 LILRA4P59901 499 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF45Q02386 682 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PCOLCEQ15113 449 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PON3Q15166 354 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CHI3L2Q15782 390 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZBTB6Q15916 424 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CARTPTQ16568 116 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PPP1R3AQ16821 1122 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CBWD6Q4V339 395 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CBWD3Q5JTY5 395 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 NKAIN2Q5VXU1 208 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 DENND2CQ68D51 928 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 HMBOX1Q6NT76 420 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CCNI2Q6ZMN8 369 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 RAB44Q7Z6P3 723 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM139Q8IV31 216 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 SPNS2Q8IVW8 549 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARHGEF19Q8IW93 802 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 MICU2Q8IYU8 434 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PDIK1LQ8N165 341 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARHGAP24Q8N264 748 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACTL9Q8TC94 416 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 DAZLQ92904 295 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 HPDLQ96IR7 371 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 LCORQ96JN0 433 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 C9orf72Q96LT7 481 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 PWWP2AQ96N64 755 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 NAPGQ99747 312 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 EGFL8Q99944 293 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM168Q9H0V1 697 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ATG10Q9H0Y0 220 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 LDAHQ9H6V9 325 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TLE6Q9H808 572 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 LRRC4Q9HBW1 653 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 SGK2Q9HBY8 427 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ABCB9Q9NP78 766 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 ADAP2Q9NPF8 381 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 MRPL17Q9NRX2 175 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CHST7Q9NS84 486 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 IMP3Q9NV31 184 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 DMAC2Q9NW81 257 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 IFNKQ9P0W0 207 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC6A14Q9UN76 642 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 UBE2J1Q9Y385 318 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 KPTNQ9Y664 436 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CDY1Q9Y6F8 540 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CITO14578 2027 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms