RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LIX1Q8N485 282 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 SLC2A12Q8TD20 617 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF721Q8TF20 911 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 CIDECQ96AQ7 238 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ART5Q96L15 291 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF317Q96PQ6 595 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PELOQ9BRX2 385 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 MYNNQ9NPC7 610 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 MED4Q9NPJ6 270 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 MYOTQ9UBF9 498 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PPIEQ9UNP9 301 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 DTX4Q9Y2E6 619 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 SPTBN1Q01082 2364 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 SVILO95425 2214 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 HDAC3O15379 428 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 RGS14O43566 566 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 AKAP10O43572 662 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 CDC40O60508 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 SLC19A2O60779 497 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ZG16O60844 167 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GUCY1B2O75343 617 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GPR75O95800 540 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 STSP08842 583 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 NEFHP12036 1026 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ABOP16442 354 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 PIK3R1P27986 724 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 FEN1P39748 380 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 RFC3P40938 356 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ALDH9A1P49189 494 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 IDH3AP50213 366 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 WNT3P56703 355 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GPR85P60893 370 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 TRA2BP62995 288 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 RNF4P78317 190 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 PLGLB1Q02325 96 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF267Q14586 743 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 PRICKLE4Q2TBC4 344 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 LSM12Q3MHD2 195 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 C6orf163Q5TEZ5 329 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ATG16L1Q676U5 607 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 EPGNQ6UW88 154 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 SLC29A4Q7RTT9 530 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 MAMDC2Q7Z304 686 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 MDGA2Q7Z553 956 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 TICAM1Q8IUC6 712 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 SULF2Q8IWU5 870 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GPALPP1Q8IXQ4 340 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 LRRC34Q8IZ02 419 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ST13P4Q8IZP2 240 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 CPSF7Q8N684 471 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 POGLUT1Q8NBL1 392 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ADCY4Q8NFM4 1077 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 OR7A2PQ8NGA2 310 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 CDC26Q8NHZ8 85 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 LRRC8CQ8TDW0 803 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 RIT1Q92963 219 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 TUBGCP3Q96CW5 907 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 SENP5Q96HI0 755 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GPR137Q96N19 417 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 GAL3ST4Q96RP7 486 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 CCT7Q99832 543 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 CCDC134Q9H6E4 229 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ASIC5Q9NY37 505 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 MAT2BQ9NZL9 334 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF639Q9UID6 485 aa8.09□□□□□ -1.11
PDLIM5-213ENST00000509357 POLEQ07864 2286 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 GNG14A0A1W2PPG7 69 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 C1orf226A1L170 272 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 ASPDHA6ND91 283 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 WIPF3A6NGB9 483 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 MYO1GB0I1T2 1018 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 G3V3Y1 287 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 ASNA1O43681 348 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 SCN2BO60939 215 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 OR6B1O95007 311 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 CBX7O95931 251 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 P04436 131 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 LAMP1P11279 417 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 CPMP14384 443 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 DDCP20711 480 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 COL8A1P27658 744 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 SSTR4P31391 388 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 MDH1P40925 334 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 SOX3P41225 446 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 FRKP42685 505 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 CDK9P50750 372 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 XKP51811 444 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 NME5P56597 212 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 ERVK-8P63133 956 aa8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 MRPS35P82673 323 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-213ENST00000509357 EMX2Q04743 252 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms