RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CAPN14A8MX76 684 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 KDM4EB2RXH2 506 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ATP1B1P05026 303 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 SNRPAP09012 282 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 NT5EP21589 574 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 FEN1P39748 380 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 CDK9P50750 372 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 DLX5P56178 289 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 NRG3P56975 720 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 EXOSC7Q15024 291 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 NNATQ16517 81 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 PRICKLE4Q2TBC4 344 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 SLC25A35Q3KQZ1 300 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ACSF3Q4G176 576 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 GLE1Q53GS7 698 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 TCHHL1Q5QJ38 904 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 RIPPLY2Q5TAB7 128 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 TMEM198Q66K66 360 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 PRR22Q8IZ63 422 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 LIX1Q8N485 282 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 C1orf52Q8N6N3 182 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 SELENOMQ8WWX9 145 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 TMEM237Q96Q45 408 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ITPAQ9BY32 194 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ANGPTL4Q9BY76 406 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 NXF5Q9H1B4 397 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ALKBH4Q9NXW9 302 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF639Q9UID6 485 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 SNX6Q9UNH7 406 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 C15orf41Q9Y2V0 281 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 L3MBTL1Q9Y468 752 aa11.91□□□□□ -0.5
HMGCS1-205ENST00000508319 NF1P21359 2839 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 C15orf38-AP3S2A0A0A6YYH1 394 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 GOLGA6L10A6NI86 522 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 FAM47E-STBD1D6RA91 191 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 ERAL1O75616 437 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 OR4F21O95013 312 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 SNX4O95219 450 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CBX7O95931 251 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 HPNP05981 417 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 ABCB1P08183 1280 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 ABHD2P08910 425 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CTAGE8P0CG41 777 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 HSD17B3P37058 310 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CLCQ05315 142 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 MAP4K2Q12851 820 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 LTB4RQ15722 352 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 FAM180BQ6P0A1 224 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 FAM111BQ6SJ93 734 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 TIFABQ6ZNK6 161 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 WDR53Q7Z5U6 358 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CTAGE4Q8IX94 777 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CLYBLQ8N0X4 340 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 RELL2Q8NC24 303 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 NAXEQ8NCW5 288 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 TM4SF18Q96CE8 201 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CTHRC1Q96CG8 243 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 KLHL29Q96CT2 875 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 CNRIP1Q96F85 164 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 GNRHR2Q96P88 292 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 TIMP4Q99727 224 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF559Q9BR84 538 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 DOCK7Q96N67 2140 aa11.9□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF469Q96JG9 3925 aaPredicted RBP11.9□□□□□ -0.51
HMGCS1-205ENST00000508319 MANBAO00462 879 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 PPM1BO75688 479 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 CSNK2A2P19784 350 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 CASP3P42574 277 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 MASP1P48740 699 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 WNT3P56703 355 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 MYBPHQ13203 477 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 RASA2Q15283 850 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 UNC50Q53HI1 259 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF678Q5SXM1 525 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 DCST1Q5T197 706 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 DESI1Q6ICB0 168 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 TMEM81Q6P7N7 255 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 PACS2Q86VP3 889 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 TMEM200AQ86VY9 491 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 CDYL2Q8N8U2 506 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 ADCY4Q8NFM4 1077 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 HGDQ93099 445 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF681Q96N22 645 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF382Q96SR6 550 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 TMEM216Q9P0N5 145 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 HEY2Q9UBP5 337 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 VPS29Q9UBQ0 182 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 CFL2Q9Y281 166 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 PLLPQ9Y342 182 aa11.89□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC6A5Q9Y345 797 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms