RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 CHD3Q12873 2000 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TRBV11-1A0A0K0K1C0 115 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 OR2W5A6NFC9 320 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 OR6C76A6NM76 312 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 A8MUI8 341 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 C17orf105B2RV13 164 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 PPP6CO00743 305 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 AZIN1O14977 448 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 RGS14O43566 566 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TMPRSS11DO60235 418 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 FGF17O60258 216 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 OR10H2O60403 315 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 ABCB7O75027 752 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 SPAG7O75391 227 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 EEDO75530 441 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 AIFM1O95831 613 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 KLK1P06870 262 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 BPGMP07738 259 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 SP1P08047 785 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 SLC35E2P0CK97 266 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TNNI3P19429 210 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 PIK3R1P27986 724 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TIA1P31483 386 aaKnown RBP eCLIP8.51□□□□□ -1.053e-7■□□□□ 10
UBE2D3-223ENST00000508249 TRHRP34981 398 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 ETV4P43268 484 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 HNRNPFP52597 415 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 SLC18A1P54219 525 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 NDUFAF5Q5TEU4 345 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 HSDL2Q6YN16 418 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 IKBIPQ70UQ0 350 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 RPS27LQ71UM5 84 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 LIX1LQ8IVB5 337 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 DND1Q8IYX4 353 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 CLYBLQ8N0X4 340 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 RNF175Q8N4F7 328 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 C1orf52Q8N6N3 182 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TMEM178AQ8NBL3 297 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 FAM98AQ8NCA5 519 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TMEM52Q8NDY8 209 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 OR4K14Q8NGD5 310 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 NUBPLQ8TB37 319 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 NUDT8Q8WV74 236 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 COX4I2Q96KJ9 171 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 SORBS1Q9BX66 1292 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 MRPL1Q9BYD6 325 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 ACPTQ9BZG2 426 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TRIM45Q9H8W5 580 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 GIMAP4Q9NUV9 329 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 EHD3Q9NZN3 535 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 CFL2Q9Y281 166 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 PCDHA9Q9Y5H5 950 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 HIVEP2P31629 2446 aa8.51□□□□□ -1.05
UBE2D3-223ENST00000508249 NCKAP5O14513 1909 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 A0A1W2PR48 441 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 GABRR3A8MPY1 467 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 TMEM114B3SHH9 223 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 PCDH7O60245 1069 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 LDB3O75112 727 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SLITRK5O94991 958 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 CD46P15529 392 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 PCSK2P16519 638 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 DNASE1P24855 282 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 GRK2P25098 689 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 ALDH3A1P30838 453 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 PTGS2P35354 604 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SERPINB4P48594 390 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 GPR143P51810 404 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 MLF1P58340 268 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 PSPHP78330 225 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 ZNF763Q0D2J5 394 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SLC48A1Q6P1K1 146 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 EXOC3L1Q86VI1 746 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 NUDCD3Q8IVD9 361 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SLC2A12Q8TD20 617 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 PTPMT1Q8WUK0 201 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 NCLNQ969V3 563 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 TMEM125Q96AQ2 219 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 ERP27Q96DN0 273 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 ZNF764Q96H86 408 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 FBXL20Q96IG2 436 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 CENPHQ9H3R5 247 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 FARSBQ9NSD9 589 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 CRIM1Q9NZV1 1036 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SLC17A7Q9P2U7 560 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 TIMM22Q9Y584 194 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 FAM215AQ9Y5M1 114 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 MPDZO75970 2070 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 KIAA1549Q9HCM3 1950 aa8.5□□□□□ -1.05
UBE2D3-223ENST00000508249 SONP18583 2426 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-223ENST00000508249 RAI1Q7Z5J4 1906 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-223ENST00000508249 GNG14A0A1W2PPG7 69 aa8.49□□□□□ -1.05
UBE2D3-223ENST00000508249 A0A1W2PPR1 153 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms