RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 A0A1B0GTL3 188 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 C1orf226A1L170 272 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 GOLGA6L10A6NI86 522 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 ERAL1O75616 437 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 PORP16435 677 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 TSPAN8P19075 237 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 S1PR1P21453 382 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 FEN1P39748 380 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 SERPINB9P50453 376 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 ZNF136P52737 540 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 GALNT1Q10472 559 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 EXOSC7Q15024 291 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 TSNAXIP1Q2TAA8 658 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 PRICKLE4Q2TBC4 344 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 DCST1Q5T197 706 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 VASNQ6EMK4 673 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 DESI1Q6ICB0 168 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 SLC48A1Q6P1K1 146 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 LETMD1Q6P1Q0 360 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 ANGPTL8Q6UXH0 198 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 TAOK1Q7L7X3 1001 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 RELL1Q8IUW5 271 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 PM20D2Q8IYS1 436 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 VWA5B2Q8N398 1253 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 C17orf47Q8NEP4 570 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 RNASE6Q93091 150 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 KLHL29Q96CT2 875 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 ITPAQ9BY32 194 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 UGT2B28Q9BY64 529 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 PRDM14Q9GZV8 571 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 LIME1Q9H400 295 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 METTL7AQ9H8H3 244 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 MAT2BQ9NZL9 334 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 MTRF1LQ9UGC7 380 aaKnown RBP10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 BCAP29Q9UHQ4 241 aa10.55□□□□□ -0.72
HMGCS1-204ENST00000507293 SYT5O00445 386 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PPP6CO00743 305 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 GUCY1B2O75343 617 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PPM1BO75688 479 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 OTCP00480 354 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PDYNP01213 254 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 IL2RAP01589 272 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 ATP1B1P05026 303 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 ABCB1P08183 1280 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 COL6A2P12110 1019 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 BMP7P18075 431 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CSNK2A2P19784 350 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PTPN6P29350 595 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 TIMP3P35625 211 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 DEKP35659 375 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PEX19P40855 299 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CDH13P55290 713 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 DUSP2Q05923 314 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 MGAT2Q10469 447 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 LTB4RQ15722 352 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 FBXL19-AS1Q494R0 122 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 FLYWCH1Q4VC44 716 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 NHSL2Q5HYW2 709 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 NSUN5P2Q63ZY6 315 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 TIGD3Q6B0B8 471 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 POMZP3Q6PJE2 187 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 SIMC1Q8NDZ2 872 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 ADCY4Q8NFM4 1077 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 OR1J4Q8NGS1 313 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 TRPC4APQ8TEL6 797 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 SELENOMQ8WWX9 145 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 NINJ1Q92982 152 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 MED12Q93074 2177 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 HGDQ93099 445 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 NTNG2Q96CW9 530 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 OMA1Q96E52 524 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 LRRC46Q96FV0 321 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 WDYHV1Q96HA8 205 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 TRIB1Q96RU8 372 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 NODALQ96S42 347 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 HBEGFQ99075 208 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 MRPL46Q9H2W6 279 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CLEC4MQ9H2X3 399 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 RASSF1Q9NS23 344 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CCM2LQ9NUG4 571 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CES1P1Q9UKY3 287 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 SNX6Q9UNH7 406 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 CFL2Q9Y281 166 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 PLLPQ9Y342 182 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
HMGCS1-204ENST00000507293 A6NNC1 897 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 A8MT66 165 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 TRIM49D1C9J1S8 452 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 POC1B-GALNT4F8VUJ3 575 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 SNPHO15079 494 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 CDH16O75309 829 aa10.53□□□□□ -0.72
HMGCS1-204ENST00000507293 KRT38O76015 456 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms