RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 KITP10721 976 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 S1PR1P21453 382 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NT5EP21589 574 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TACR1P25103 407 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 LSP1P33241 339 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 S100A3P33764 101 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 CYB561P49447 251 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 HLCSP50747 726 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 SSR4P51571 173 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NCBP2P52298 156 aaKnown RBP eCLIP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 EFNA3P52797 238 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 ARFIP2P53365 341 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 MGAT2Q10469 447 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 KLRB1Q12918 225 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TP53BP2Q13625 1128 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 EFR3AQ14156 821 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 EBPQ15125 230 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 ZSWIM7Q19AV6 140 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NXNQ6DKJ4 435 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 Q6ZS92 163 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 METTL25Q8N6Q8 603 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF441Q8N8Z8 693 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 FAM98AQ8NCA5 519 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 FDCSPQ8NFU4 85 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 NCLNQ969V3 563 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TMEM125Q96AQ2 219 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 ITCHQ96J02 903 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 LCORQ96JN0 433 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 UTP23Q9BRU9 249 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 LMF2Q9BU23 707 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 OR8D2Q9GZM6 311 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 WWTR1Q9GZV5 400 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 GLIPR2Q9H4G4 154 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 DDX18Q9NVP1 670 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 MARCOQ9UEW3 520 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 EXO1Q9UQ84 846 aaKnown RBP7.86□□□□□ -1.15
PDGFC-205ENST00000506880 ATRXP46100 2492 aa7.86□□□□□ -1.15
PDGFC-205ENST00000506880 TRBV11-1A0A0K0K1C0 115 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 C2orf92A0A1B0GVN3 265 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 OR6C70A6NIJ9 312 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ERN1O75460 977 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 KRT75O95678 551 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 JUNP05412 331 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ALDOCP09972 364 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ITGAMP11215 1152 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 CD46P15529 392 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 UQCRC2P22695 453 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 MAP3K8P41279 467 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 CCL11P51671 97 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 POLR2JP52435 117 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 DIO3P55073 304 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 KCNK10P57789 538 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 GUCY1A3Q02108 690 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 Q0VFX4 171 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 FADDQ13158 208 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 SRSF6Q13247 344 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 GNA13Q14344 377 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF267Q14586 743 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 PTGR1Q14914 329 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 LINC00303Q3SY05 128 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 SLC9B1Q4ZJI4 515 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 FHL5Q5TD97 284 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 PRAMEF8Q5VWM4 474 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 PRAMEF7Q5VXH5 474 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 RTL4Q6ZR62 310 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 SHISA6Q6ZSJ9 500 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 FAM47EQ6ZV65 393 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ASB18Q6ZVZ8 466 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 MAVSQ7Z434 540 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 CPLX4Q7Z7G2 160 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 DPP10Q8N608 796 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 BRIX1Q8TDN6 353 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 EXTL1Q92935 676 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ADIPOR1Q96A54 375 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 EXOSC8Q96B26 276 aaKnown RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 C8orf44Q96CB5 159 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ABHD17AQ96GS6 310 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 EGLN2Q96KS0 407 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 VSTM2LQ96N03 204 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 RILPQ96NA2 401 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 G6PC3Q9BUM1 346 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 CNPPD1Q9BV87 410 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 SPATA9Q9BWV2 254 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 RBCK1Q9BYM8 510 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 EPN3Q9H201 632 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 Q9N2J8 555 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 NPHS2Q9NP85 383 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 FGFR1OP2Q9NVK5 253 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 WDR70Q9NW82 654 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 QPCTLQ9NXS2 382 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 STMN3Q9NZ72 180 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ABCG2Q9UNQ0 655 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 ERVK-19Q9WJR5 959 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 B3GNT3Q9Y2A9 372 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 GPR55Q9Y2T6 319 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 KLF13Q9Y2Y9 288 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms