RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 FBXL4Q9UKA2 621 aa18.71■□□□□ 0.59
SMIM20-201ENST00000506197 MAN2B2Q9Y2E5 1009 aa18.71■□□□□ 0.59
SMIM20-201ENST00000506197 ASH1LQ9NR48 2969 aaKnown RBP18.71■□□□□ 0.59
SMIM20-201ENST00000506197 SETXQ7Z333 2677 aaKnown RBP18.7■□□□□ 0.58
SMIM20-201ENST00000506197 A0A087WV62 115 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 A0A096LPI6 279 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 PLOD2O00469 737 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 MRASO14807 208 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 HPP00738 406 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 IFI6P09912 130 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 CT62P0C5K7 136 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SFTPCP11686 197 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SLC26A5P58743 744 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 PRR5P85299 388 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 ATP1A4Q13733 1029 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 EXT1Q16394 746 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 PAGE3Q5JUK9 113 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 BORAQ6PGQ7 559 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 ZNF621Q6ZSS3 439 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 B3GNT7Q8NFL0 401 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 DNAJB8Q8NHS0 232 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 GOT1L1Q8NHS2 421 aaPredicted RBP18.7■□□□□ 0.58
SMIM20-201ENST00000506197 PSMA8Q8TAA3 256 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SLC2A12Q8TD20 617 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 THAP4Q8WY91 577 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 MOAP1Q96BY2 351 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SENP5Q96HI0 755 aaPredicted RBP18.7■□□□□ 0.58
SMIM20-201ENST00000506197 NPAS2Q99743 824 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 CXorf36Q9H7Y0 433 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 ZNF160Q9HCG1 818 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SERHLQ9NQF3 203 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 ARL8BQ9NVJ2 186 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMIM20-201ENST00000506197 BCAP29Q9UHQ4 241 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 TAGLN3Q9UI15 199 aa18.7■□□□□ 0.58
SMIM20-201ENST00000506197 MYO18BQ8IUG5 2567 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CCT8L1PA6NM43 557 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 FBP2O00757 339 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 NKX2-8O15522 239 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 EMC8O43402 210 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 PLOD3O60568 738 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 COQ9O75208 318 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 ERN1O75460 977 aaKnown RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 BCAS2O75934 225 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 DDAH2O95865 285 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 GSNP06396 782 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 UQCRC2P22695 453 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CDKN2CP42773 168 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CCT3P49368 545 aaKnown RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 GABPB1Q06547 395 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 MGAT2Q10469 447 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CDC20Q12834 499 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 NFYCQ13952 458 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 BTBD16Q32M84 506 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CRTC2Q53ET0 693 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 TRMT12Q53H54 448 aaKnown RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 BHLHB9Q6PI77 547 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 TMEM64Q6YI46 380 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 RNF111Q6ZNA4 994 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 DHDDSQ86SQ9 333 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 DPP10Q8N608 796 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 OR7G2Q8NG99 324 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 OR7G1Q8NGA0 311 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 OR1N1Q8NGS0 311 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 SFXN5Q8TD22 340 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 NCLNQ969V3 563 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 CTHRC1Q96CG8 243 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 RCN3Q96D15 328 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 VMP1Q96GC9 406 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 FER1L6-AS2Q96M78 137 aa18.69■□□□□ 0.58
SMIM20-201ENST00000506197 SIRT3Q9NTG7 399 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 ZCCHC3Q9NUD5 404 aaKnown RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 HEMK1Q9Y5R4 338 aaPredicted RBP18.69■□□□□ 0.58
SMIM20-201ENST00000506197 RNF103-CHMP3A0A140T963 221 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 HRKO00198 91 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 AIM2O14862 343 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 SLC28A2O43868 658 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 PRAMEF2O60811 474 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 ESRRAP11474 423 aaPredicted RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 ICAM2P13598 275 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 SSTR4P31391 388 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 CHI3L1P36222 383 aaPredicted RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 AP2B1P63010 937 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 FUT7Q11130 342 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 EXOSC7Q15024 291 aaKnown RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 ATP1A1-AS1Q5TC04 95 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 PRICKLE2Q7Z3G6 844 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 RETREG3Q86VR2 466 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 NFAM1Q8NET5 270 aaPredicted RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 NUP43Q8NFH3 380 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 OR56A1Q8NGH5 318 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 OR5AK3PQ8NH89 298 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 FAM120BQ96EK7 910 aaKnown RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 NSL1Q96IY1 281 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 IMMP1LQ96LU5 166 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 SLC35A5Q9BS91 424 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 PAIP1Q9H074 479 aaKnown RBP18.68■□□□□ 0.58
SMIM20-201ENST00000506197 EFCAB1Q9HAE3 211 aa18.68■□□□□ 0.58
SMIM20-201ENST00000506197 IL1RL2Q9HB29 575 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms