RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ATP4BP51164 291 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 GYS2P54840 703 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 WNT3P56703 355 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 HSPB3Q12988 150 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 EXOSC7Q15024 291 aaKnown RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 RPS6KA2Q15349 733 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 TMEM107Q6UX40 140 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 BEST3Q8N1M1 668 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 OR52R1Q8NGF1 315 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 ANKRA2Q9H9E1 313 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 NEUROD4Q9HD90 331 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 ZNF71Q9NQZ8 489 aaPredicted RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 C19orf53Q9UNZ5 99 aaPredicted RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 CFL2Q9Y281 166 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
RNF4-202ENST00000502316 YARS2Q9Y2Z4 477 aaKnown RBP13.14□□□□□ -0.31
RNF4-202ENST00000502316 UPK1AO00322 258 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 FCHO1O14526 889 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 DPM1O60762 260 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 ITGA10O75578 1167 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 SLC22A3O75751 556 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 OR2J2O76002 312 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 WDPCPO95876 746 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 GPX3P22352 226 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 LSP1P33241 339 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 ZFP36L2P47974 494 aaKnown RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 CDK9P50750 372 aaKnown RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 NME5P56597 212 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 PHC1P78364 1004 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 PGS1Q32NB8 556 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 FAM174BQ3ZCQ3 159 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 OR4F3Q6IEY1 312 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 MIER2Q8N344 545 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 ZADH2Q8N4Q0 377 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 RBMXL3Q8N7X1 1067 aaKnown RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 RASL10BQ96S79 203 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 ZNF385DQ9H6B1 395 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 SIRT3Q9NTG7 399 aaPredicted RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 TAS2R9Q9NYW1 312 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 ABI3Q9P2A4 366 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 KLHL14Q9P2G3 628 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 PRODH2Q9UF12 536 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 COPG1Q9Y678 874 aaKnown RBP13.13□□□□□ -0.31
RNF4-202ENST00000502316 COL6A6A6NMZ7 2263 aa13.13□□□□□ -0.31
RNF4-202ENST00000502316 PRSS51A0A1B0GVH4 220 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 C2orf92A0A1B0GVN3 265 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 OR5H15A6NDH6 313 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 WWP2O00308 870 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 COQ9O75208 318 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
RNF4-202ENST00000502316 IL6P05231 212 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 PGRP06401 933 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 EFNA1P20827 205 aaPredicted RBP13.12□□□□□ -0.31
RNF4-202ENST00000502316 GPC1P35052 558 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TNFSF10P50591 281 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 SSR4P51571 173 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 STX1BP61266 288 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 PIGGQ5H8A4 983 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TMEM64Q6YI46 380 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 C16orf47Q6ZP98 133 aaPredicted RBP13.12□□□□□ -0.31
RNF4-202ENST00000502316 Q6ZS92 163 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 OR9I1Q8NGQ6 314 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 VSTM2LQ96N03 204 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 RILPQ96NA2 401 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 GAL3ST4Q96RP7 486 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 ZBTB18Q99592 522 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 LIN28AQ9H9Z2 209 aaKnown RBP13.12□□□□□ -0.31
RNF4-202ENST00000502316 FAM120CQ9NX05 1096 aaKnown RBP13.12□□□□□ -0.31
RNF4-202ENST00000502316 PLA2G3Q9NZ20 509 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 TRIM33Q9UPN9 1127 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 CSAG2Q9Y5P2 127 aa13.12□□□□□ -0.31
RNF4-202ENST00000502316 FAM234BA2RU67 622 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 C9JVG2 144 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 ZNF354AO60765 605 aaPredicted RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 C6orf47O95873 294 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 S100A3P33764 101 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 CD96P40200 585 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 PPICP45877 212 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 HLCSP50747 726 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms