RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MC3RP41968 323 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 PRIM2P49643 509 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 CDK9P50750 372 aaKnown RBP18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 CHAF1BQ13112 559 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 FADDQ13158 208 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 SPATS1Q496A3 300 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 DCAF10Q5QP82 559 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 C6orf10Q5SRN2 563 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 FAAH2Q6GMR7 532 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 H3F3CQ6NXT2 135 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 FAM180BQ6P0A1 224 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 C8orf82Q6P1X6 216 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC2A7Q6PXP3 512 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 DGAT2L6Q6ZPD8 337 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ZNF621Q6ZSS3 439 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 VASH2Q86V25 355 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ANKRD46Q86W74 232 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 APLFQ8IW19 511 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 OR8J3Q8NGG0 315 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ZFP90Q8TF47 636 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 LRRC58Q96CX6 371 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 CGREF1Q99674 301 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 OR10A5Q9H207 317 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ATP13A2Q9NQ11 1180 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ARL8BQ9NVJ2 186 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 FBXL4Q9UKA2 621 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 ERVK-19Q9WJR5 959 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 PCDHB14Q9Y5E9 798 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 MRPS18BQ9Y676 258 aaKnown RBP18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 SCN2AQ99250 2005 aa18.37■□□□□ 0.53
SCAMP3-209ENST00000497470 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 EFSO43281 561 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 CPSF4O95639 269 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 APC2O95996 2303 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 GUSBP08236 651 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 CD1EP15812 388 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 GPX2P18283 190 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 EMDP50402 254 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 RASSF2P50749 326 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 FOXL2P58012 376 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 TLE3Q04726 772 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 CDC20Q12834 499 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 BNIP1Q12981 228 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 NFYCQ13952 458 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 LTB4RQ15722 352 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 TRMT12Q53H54 448 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 RUNDC3AQ59EK9 446 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 FAM111BQ6SJ93 734 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 TMEM107Q6UX40 140 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 RNF111Q6ZNA4 994 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 DHDDSQ86SQ9 333 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 CDRT4Q8N9R6 151 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 NUP43Q8NFH3 380 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 ADCY4Q8NFM4 1077 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 C8orf44Q96CB5 159 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 GIMAP5Q96F15 307 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 ANKRD27Q96NW4 1050 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 STACQ99469 402 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 GPATCH1Q9BRR8 931 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 INPP5KQ9BT40 448 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 TPT1P8Q9HAU6 139 aa18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 ZCCHC3Q9NUD5 404 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-209ENST00000497470 K7ENP7 123 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 FXYD1O00168 92 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 ZFAND5O76080 213 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 SEC24DO94855 1032 aaPredicted RBP18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 CLPSP04118 112 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 T-ENOLP0DO92 83 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 BMP2P12643 396 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 DRD5P21918 477 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 PPICP45877 212 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 EEF1A2Q05639 463 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 ART3Q13508 389 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 INO80CQ6PI98 192 aaPredicted RBP18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 CCDC81Q6ZN84 652 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 GPR155Q7Z3F1 870 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 C6orf120Q7Z4R8 191 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 KBTBD2Q8IY47 623 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC15A4Q8N697 577 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 POU5F2Q8N7G0 328 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 KAT2AQ92830 837 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 NCLNQ969V3 563 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 RCN3Q96D15 328 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 VSTM2LQ96N03 204 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 BTBD9Q96Q07 612 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC35A5Q9BS91 424 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 LMF2Q9BU23 707 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 CNPPD1Q9BV87 410 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 SPATA9Q9BWV2 254 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 ACTRT3Q9BYD9 372 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 OR8D2Q9GZM6 311 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 DUSP22Q9NRW4 184 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 GPATCH2Q9NW75 528 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC25A37Q9NYZ2 338 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 PCDHGB3Q9Y5G1 929 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 HEMK1Q9Y5R4 338 aaPredicted RBP18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 NCOR2Q9Y618 2525 aa18.35■□□□□ 0.53
SCAMP3-209ENST00000497470 RNF103-CHMP3A0A140T963 221 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 EVPLLA8MZ36 301 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms