RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SOAT1P35610 550 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 CCT3P49368 545 aaKnown RBP20.24■□□□□ 0.83
C9orf3-222ENST00000496567 SLC37A1P57057 533 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 EXOSC7Q15024 291 aaKnown RBP20.24■□□□□ 0.83
C9orf3-222ENST00000496567 PAGE3Q5JUK9 113 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 HSDL2Q6YN16 418 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 ZNF621Q6ZSS3 439 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 ZNF321PQ8N8H1 164 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 OR52R1Q8NGF1 315 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 FAM120BQ96EK7 910 aaKnown RBP20.24■□□□□ 0.83
C9orf3-222ENST00000496567 ZCCHC3Q9NUD5 404 aaKnown RBP20.24■□□□□ 0.83
C9orf3-222ENST00000496567 PRODH2Q9UF12 536 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 ERVK-11Q9UQG0 969 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 CELSR3Q9NYQ7 3312 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 DMXL2Q8TDJ6 3036 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 ERN1O75460 977 aaKnown RBP20.23■□□□□ 0.83
C9orf3-222ENST00000496567 KCNH1O95259 989 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 ZCCHC18P0CG32 403 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 JMJD6Q6NYC1 403 aaPredicted RBP20.23■□□□□ 0.83
C9orf3-222ENST00000496567 SZRD1Q7Z422 152 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 ZFHX4Q86UP3 3567 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 DPP10Q8N608 796 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 POU5F2Q8N7G0 328 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 ZNF615Q8N8J6 731 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 NUP43Q8NFH3 380 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 OR56A1Q8NGH5 318 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 OR8K3Q8NH51 312 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 ING2Q9H160 280 aa20.23■□□□□ 0.83
C9orf3-222ENST00000496567 A0A096LPI6 279 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 TRBV11-1A0A0K0K1C0 115 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 CLPSP04118 112 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 CDKN2CP42773 168 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 Q0VFX4 171 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 SLC29A4Q7RTT9 530 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 TRPM8Q7Z2W7 1104 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 PCYOX1LQ8NBM8 494 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 PHF12Q96QT6 1004 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 DEFB126Q9BYW3 111 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 TRIM4Q9C037 500 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 ANKRA2Q9H9E1 313 aa20.22■□□□□ 0.83
C9orf3-222ENST00000496567 MASP2O00187 686 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 FBP2O00757 339 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 ZFAND5O76080 213 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 GSNP06396 782 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 PRKAG1P54619 331 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 SOX8P57073 446 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 KRT72Q14CN4 511 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 LRIF1Q5T3J3 769 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 IRAK1BP1Q5VVH5 260 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 REP15Q6BDI9 236 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 DNAJC14Q6Y2X3 702 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 RETREG3Q86VR2 466 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 APLFQ8IW19 511 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 SIMC1Q8NDZ2 872 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 OR5L2Q8NGL0 311 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 C16orf52Q8NHV5 167 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 SNRNP27Q8WVK2 155 aaKnown RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 THOC3Q96J01 351 aaKnown RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 MS4A4EQ96PG1 132 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 SLC35A5Q9BS91 424 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 LHPPQ9H008 270 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 PAIP1Q9H074 479 aaKnown RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 ZNF223Q9UK11 482 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 ZMIZ1Q9ULJ6 1067 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 HEMK1Q9Y5R4 338 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 KCNMB2Q9Y691 235 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 RNF103-CHMP3A0A140T963 221 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 MRASO14807 208 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 PSMG1O95456 288 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 NPPAP01160 153 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 CELA2AP08217 269 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 ITGAMP11215 1152 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 ITGA3P26006 1051 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 CHI3L1P36222 383 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 EMDP50402 254 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 CXADRP78310 365 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 RNF4P78317 190 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 DUSP8Q13202 625 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 TP53BP2Q13625 1128 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 MYBPC3Q14896 1274 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 DHDDSQ86SQ9 333 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 GALNT16Q8N428 558 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 KIF2BQ8N4N8 673 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 OR5AK3PQ8NH89 298 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 TAGLN3Q9UI15 199 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 PCDHB14Q9Y5E9 798 aa20.21■□□□□ 0.83
C9orf3-222ENST00000496567 NUP214P35658 2090 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-222ENST00000496567 PTPN6P29350 595 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 CHAF1BQ13112 559 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 GAB1Q13480 694 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 NFYCQ13952 458 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 HLA-DQA1Q5Y7H0 255 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 ZCCHC12Q6PEW1 402 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 C9orf40Q8IXQ3 194 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 AMER2Q8N7J2 671 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 NUBPLQ8TB37 319 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 APOBEC4Q8WW27 367 aaKnown RBP20.2■□□□□ 0.82
C9orf3-222ENST00000496567 NPAS2Q99743 824 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 EFCAB1Q9HAE3 211 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 GID8Q9NWU2 228 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms