RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	VCL	P18206	1134 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	IDS	P22304	550 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KDELR1	P24390	212 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	PEBP1	P30086	187 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	SSTR2	P30874	369 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	GP5	P40197	560 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	CDKN2B	P42772	138 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	MARCKSL1	P49006	195 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	LMAN1	P49257	510 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	GSDMD	P57764	484 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	XIAP	P98170	497 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	TLE4	Q04727	773 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	C17orf67	Q0P5P2	114 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	MSLN	Q13421	630 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	PTPRCAP	Q14761	206 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	ZIC1	Q15915	447 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF124	Q15973	351 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	HADH	Q16836	314 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	MMEL1	Q495T6	779 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	AARS2	Q5JTZ9	985 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	CCDC122	Q5T0U0	273 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	LRRC8E	Q6NSJ5	796 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	ALKBH5	Q6P6C2	394 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	SASS6	Q6UVJ0	657 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	IGFL3	Q6UXB1	125 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	QSOX2	Q6ZRP7	698 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	RBPMS2	Q6ZRY4	209 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	CDHR3	Q6ZTQ4	885 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	COX15	Q7KZN9	410 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	DET1	Q7L5Y6	550 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	TAOK1	Q7L7X3	1001 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	GLT6D1	Q7Z4J2	308 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	CUZD1	Q86UP6	607 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	NT5DC3	Q86UY8	548 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	AMZ2	Q86W34	360 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KCNMB4	Q86W47	210 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	HPS6	Q86YV9	775 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KRTAP19-1	Q8IUB9	90 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	TMEM126B	Q8IUX1	230 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	PHC2	Q8IXK0	858 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KLHDC8B	Q8IXV7	354 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	CADM3	Q8N126	398 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	CCNY	Q8ND76	341 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	OR2L2	Q8NH16	312 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	HM13	Q8TCT9	377 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	ZFPM2	Q8WW38	1151 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KAT2A	Q92830	837 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	MR1	Q95460	341 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	LINC00615	Q96LM1	132 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	C12orf66	Q96MD2	445 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF830	Q96NB3	372 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	GBP5	Q96PP8	586 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	NAA11	Q9BSU3	229 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	HGH1	Q9BTY7	390 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	NLN	Q9BYT8	704 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	NUF2	Q9BZD4	464 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	GBA3	Q9H227	469 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	OR52A5	Q9H2C5	316 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	CXXC4	Q9H2H0	198 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	LIME1	Q9H400	295 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	TRABD	Q9H4I3	376 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	RANGRF	Q9HD47	186 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	SOHLH2	Q9NX45	425 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	TES	Q9UGI8	421 aa	Known RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	ACAD8	Q9UKU7	415 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	SNX7	Q9UNH6	387 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	DHDH	Q9UQ10	334 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	HEY1	Q9Y5J3	304 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	KLF2	Q9Y5W3	355 aa	Predicted RBP	4	□□□□□ -1.77
VPS52-222	ENST00000495981	BIRC6	Q9NR09	4857 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	DOCK10	Q96BY6	2186 aa		4	□□□□□ -1.77
VPS52-222	ENST00000495981	MGAM2	Q2M2H8	2515 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	MDC1	Q14676	2089 aa	Known RBP	3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	NCOA6	Q14686	2063 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	hCG_1818297	A0A087WSY0	165 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	TRBV5-4	A0A0C4DH59	114 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	TRBC2	A0A5B9	178 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	OR6C74	A6NCV1	312 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	CXorf65	A6NEN9	183 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	MGAT4D	A6NG13	374 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC9B1P1	A6NJY1	282 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	TMEM150C	B9EJG8	249 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	BTN3A3	O00478	584 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	CCL22	O00626	93 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	KCNN4	O15554	427 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	SEC14L5	O43304	696 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	HS6ST1	O60243	411 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	UGT1A9	O60656	530 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	DPM1	O60762	260 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	KCNJ13	O60928	360 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	POP7	O75817	140 aa	Known RBP	3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	MBD3	O95983	291 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	HLA-DQA2	P01906	255 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	ABCB1	P08183	1280 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	STS	P08842	583 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	TPBGL	P0DKB5	382 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	UGT1A6	P19224	532 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	CYP2A7	P20853	494 aa		3.99	□□□□□ -1.77
VPS52-222	ENST00000495981	DRD4	P21917	467 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms