RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 METTL2AQ96IZ6 378 aaKnown RBP10.78□□□□□ -0.68
UBA3-211ENST00000493957 ART5Q96L15 291 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 GLIPR2Q9H4G4 154 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 AKTIPQ9H8T0 292 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
UBA3-211ENST00000493957 MIEF1Q9NQG6 463 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 NPDC1Q9NQX5 325 aaPredicted RBP10.78□□□□□ -0.68
UBA3-211ENST00000493957 THAP1Q9NVV9 213 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 EHD3Q9NZN3 535 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 PSME2Q9UL46 239 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 ENTPD4Q9Y227 616 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 YARS2Q9Y2Z4 477 aaKnown RBP10.78□□□□□ -0.68
UBA3-211ENST00000493957 DIDO1Q9BTC0 2240 aaKnown RBP10.78□□□□□ -0.68
UBA3-211ENST00000493957 POLEQ07864 2286 aa10.78□□□□□ -0.68
UBA3-211ENST00000493957 A0A0G2JMM0 328 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 A0A1W2PPB8 328 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 A0A1W2PRS3 328 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 KIR3DP1A8MWS1 328 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 HMGB1P1B2RPK0 211 aaPredicted RBP10.77□□□□□ -0.69
UBA3-211ENST00000493957 G3V3Y1 287 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 SDHDO14521 159 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 DYRK3O43781 588 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 SLC25A12O75746 678 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 SP1P08047 785 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 GPX3P22352 226 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 CYB561P49447 251 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
UBA3-211ENST00000493957 NCBP2P52298 156 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBA3-211ENST00000493957 PDE7AQ13946 482 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 PIGGQ5H8A4 983 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 FHL5Q5TD97 284 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 C6orf163Q5TEZ5 329 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 MYO7BQ6PIF6 2116 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 SLC29A4Q7RTT9 530 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 ZNF551Q7Z340 670 aaPredicted RBP10.77□□□□□ -0.69
UBA3-211ENST00000493957 GALNTL5Q7Z4T8 443 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 PRR22Q8IZ63 422 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 FAM9CQ8IZT9 166 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 CYP4Z2PQ8N1L4 340 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 TMEM156Q8N614 296 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 OR7A2PQ8NGA2 310 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 OR52R1Q8NGF1 315 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 NUBPLQ8TB37 319 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 ASB15Q8WXK1 588 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 ADIPOR1Q96A54 375 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 BBS4Q96RK4 519 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 ITPAQ9BY32 194 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 REEP4Q9H6H4 257 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 DEPPQ9NTK1 212 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 BCAP29Q9UHQ4 241 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 TMED5Q9Y3A6 229 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 COPG1Q9Y678 874 aaKnown RBP10.77□□□□□ -0.69
UBA3-211ENST00000493957 MED12Q93074 2177 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 RELNP78509 3460 aa10.77□□□□□ -0.69
UBA3-211ENST00000493957 DOPEY2Q9Y3R5 2298 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 GOLGA8QA0A0J9YX86 632 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 PINLYPA6NC86 204 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 GOLGA8OA6NCC3 632 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 OR6C76A6NM76 312 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 A8MVJ9 347 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 TCP11X1B4DZS4 312 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 GOLGA8NF8WBI6 632 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 NME2P1O60361 137 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 G6PDP11413 515 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 NME2P22392 152 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 MST1P26927 711 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 RFC3P40938 356 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 MC3RP41968 323 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 EMDP50402 254 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 NR0B1P51843 470 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 DIO3P55073 304 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 GPR85P60893 370 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 PPP2R2AP63151 447 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 MRPL49Q13405 166 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 MAPKAPK3Q16644 382 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 RNFT1Q5M7Z0 435 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 ATG16L1Q676U5 607 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 DESI1Q6ICB0 168 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 SLC25A25Q6KCM7 469 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 RPUSD3Q6P087 351 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 TMEM107Q6UX40 140 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 WDR75Q8IWA0 830 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 C7orf57Q8NEG2 295 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 OR7G1Q8NGA0 311 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 OR5L2Q8NGL0 311 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 RAB3IL1Q8TBN0 382 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 ZNF675Q8TD23 568 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 PPCDCQ96CD2 204 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 C5orf34Q96MH7 638 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 AMDHD1Q96NU7 426 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 BARD1Q99728 777 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 NXF5Q9H1B4 397 aaKnown RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 WDR55Q9H6Y2 383 aaPredicted RBP10.76□□□□□ -0.69
UBA3-211ENST00000493957 MEAF6Q9HAF1 191 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 SLCO1B3Q9NPD5 702 aa10.76□□□□□ -0.69
UBA3-211ENST00000493957 GIMAP4Q9NUV9 329 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms