RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MAPK12P53778 367 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ARSFP54793 590 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 STXBP1P61764 594 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ELF3P78545 371 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 C2orf80Q0P641 193 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PDE7AQ13946 482 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 NFYCQ13952 458 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CAPRIN1Q14444 709 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PRSS53Q2L4Q9 553 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 DPY19L1Q2PZI1 675 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 EIF2S3LQ2VIR3 472 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PGS1Q32NB8 556 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 TRMT5Q32P41 509 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PRR30Q53SZ7 412 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ZNF385BQ569K4 471 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 DCAF10Q5QP82 559 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CPTPQ5TA50 214 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 OR4F3Q6IEY1 312 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 MRM1Q6IN84 353 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ANKRD26P1Q6NSI1 321 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 DLEU7Q6UYE1 221 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 MSANTD1Q6ZTZ1 278 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 IKBIPQ70UQ0 350 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PPP1R32Q7Z5V6 425 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CAMKMTQ7Z624 323 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 MRGPREQ86SM8 312 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 DHDDSQ86SQ9 333 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SCUBE1Q8IWY4 988 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ULK2Q8IYT8 1036 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 MMP21Q8N119 569 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ARHGAP24Q8N264 748 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ZCCHC7Q8N3Z6 543 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 GALNT16Q8N428 558 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CSNK1A1LQ8N752 337 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 Q8NA96 180 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CAMKVQ8NCB2 501 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 FAM13CQ8NE31 585 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SRFBP1Q8NEF9 429 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 OR8J2Q8NGG1 315 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 OR2Y1Q8NGV0 311 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 UTP15Q8TED0 518 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 GTF2H4Q92759 462 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 RERGQ96A58 199 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 TM4SF18Q96CE8 201 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 LRRC58Q96CX6 371 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 COQ8BQ96D53 544 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SMIM10Q96HG1 83 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 FER1L6-AS2Q96M78 137 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 IP6K3Q96PC2 410 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 KCNC2Q96PR1 638 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PSMG3-AS1Q96PY0 264 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 OR52E6Q96RD3 313 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 CDRT15Q96T59 188 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SMAD5Q99717 465 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 TBCDQ9BTW9 1192 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 REEP4Q9H6H4 257 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 ZNF552Q9H707 407 aaPredicted RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SERHLQ9NQF3 203 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 GID8Q9NWU2 228 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 P4HTMQ9NXG6 502 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SLAMF8Q9P0V8 285 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PACSIN3Q9UKS6 424 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PRPF19Q9UMS4 504 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 SRPK3Q9UPE1 567 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 WBP11Q9Y2W2 641 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 TNRC6AQ8NDV7 1962 aaKnown RBP7.09□□□□□ -1.27
CLDN1-202ENST00000490800 MED13Q9UHV7 2174 aa7.09□□□□□ -1.27
CLDN1-202ENST00000490800 PCSK5Q92824 1860 aa7.09□□□□□ -1.28
CLDN1-202ENST00000490800 SCN3AQ9NY46 2000 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SEC16AO15027 2179 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ARHGAP10A1A4S6 786 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TBX19O60806 448 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PDE5AO76074 875 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ATE1O95260 518 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 NPPAP01160 153 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 EIF2S1P05198 315 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 FAM58BPP0C7Q3 252 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC35G6P0C7Q6 338 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 GP1BBP13224 206 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 HOXB9P17482 250 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC6A2P23975 617 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CERS1P27544 350 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 NOS3P29474 1203 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 RPL3P39023 403 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 GSTM5P46439 218 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 OR1D4P47884 311 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC7A2P52569 658 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 HNRNPFP52597 415 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MTTPP55157 894 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 VSX2P58304 361 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 RAB8AP61006 207 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TRA2BP62995 288 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 BTN3A2P78410 334 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PLIN5Q00G26 463 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 KLC1Q07866 573 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms