RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 SLC15A4Q8N697 577 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 FAM13CQ8NE31 585 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 OR7G1Q8NGA0 311 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 OR52R1Q8NGF1 315 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 AGR3Q8TD06 166 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 PAQR8Q8TEZ7 354 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 TRMOQ9BU70 441 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 RRAGDQ9NQL2 400 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-214ENST00000490398 PFDN4Q9NQP4 134 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 SLC35C2Q9NQQ7 365 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 SACM1LQ9NTJ5 587 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 CNOT11Q9UKZ1 510 aaKnown RBP16.69■□□□□ 0.26
COL9A3-214ENST00000490398 TRAF6Q9Y4K3 522 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 HRH3Q9Y5N1 445 aa16.69■□□□□ 0.26
COL9A3-214ENST00000490398 CHCHD2Q9Y6H1 151 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-214ENST00000490398 CCL21O00585 134 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 CDC40O60508 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL9A3-214ENST00000490398 SEC22BO75396 215 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 DDCP20711 480 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 PRPH2P23942 346 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 EMDP50402 254 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 PLGLB1Q02325 96 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 HEPACAMQ14CZ8 416 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 CEBPEQ15744 281 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 NTRK2Q16620 822 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 ANKRD26P1Q6NSI1 321 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 C3P1Q6ZMU1 363 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 Q6ZPB1 254 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-214ENST00000490398 GHDCQ8N2G8 530 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 TMEM251Q8N6I4 163 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 TP53INP1Q96A56 240 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 CCDC120Q96HB5 630 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 FAM173AQ9BQD7 235 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 LRTM1Q9HBL6 345 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 MYNNQ9NPC7 610 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 ZDHHC2Q9UIJ5 367 aa16.68■□□□□ 0.26
COL9A3-214ENST00000490398 A0A1B0GUH1 482 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 WDR91A4D1P6 747 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 MYO1GB0I1T2 1018 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 NPIPB8E9PQR5 432 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 SLC28A1O00337 649 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 PIP5K1BO14986 540 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 ITM2AO43736 263 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 LYPLA1O75608 230 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-214ENST00000490398 P04436 131 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 FGF4P08620 206 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 RFPL3SP0C7P2 107 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 MAGEA5P43359 124 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 RBPJQ06330 500 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 RFTN2Q52LD8 501 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-214ENST00000490398 SH2D4BQ5SQS7 431 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 HLA-DQA1Q5Y7H0 255 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 SLC22A10Q63ZE4 541 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 DOLPP1Q86YN1 238 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 TAGAPQ8N103 731 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 OR7G2Q8NG99 324 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 CLHC1Q8NHS4 586 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 TWIST2Q8WVJ9 160 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 GFM2Q969S9 779 aaKnown RBP16.67■□□□□ 0.26
COL9A3-214ENST00000490398 MAGED4Q96JG8 741 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 FCRL1Q96LA6 429 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 C3orf30Q96M34 536 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 CENPHQ9H3R5 247 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 ZDHHC11Q9H8X9 412 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 C1orf109Q9NX04 203 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 BAIAP2L1Q9UHR4 511 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 NPFFR2Q9Y5X5 522 aa16.67■□□□□ 0.26
COL9A3-214ENST00000490398 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
COL9A3-214ENST00000490398 CRYBG3Q68DQ2 2970 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 EML6Q6ZMW3 1958 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 LRRC3CA6NJW4 275 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 ADAM10O14672 748 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
COL9A3-214ENST00000490398 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
COL9A3-214ENST00000490398 RGS14O43566 566 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 JUNP05412 331 aaKnown RBP16.66■□□□□ 0.26
COL9A3-214ENST00000490398 SDC1P18827 310 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 SERPINB4P48594 390 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 ADORA2A-AS1P86434 159 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 RNF165Q6ZSG1 346 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 DDIASQ8IXT1 998 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 CLYBLQ8N0X4 340 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 FBXW8Q8N3Y1 598 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 ZNF675Q8TD23 568 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 PHF12Q96QT6 1004 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 IL1RL2Q9HB29 575 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 EHD3Q9NZN3 535 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 TNFRSF10DQ9UBN6 386 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 ENTPD4Q9Y227 616 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 CELSR2Q9HCU4 2923 aa16.66■□□□□ 0.26
COL9A3-214ENST00000490398 DIDO1Q9BTC0 2240 aaKnown RBP16.65■□□□□ 0.26
COL9A3-214ENST00000490398 UNC79Q9P2D8 2635 aa16.65■□□□□ 0.26
COL9A3-214ENST00000490398 ABOP16442 354 aa16.65■□□□□ 0.26
COL9A3-214ENST00000490398 ABCD3P28288 659 aa16.65■□□□□ 0.26
COL9A3-214ENST00000490398 RPL38P63173 70 aaKnown RBP16.65■□□□□ 0.26
COL9A3-214ENST00000490398 CDSNQ15517 529 aa16.65■□□□□ 0.26
COL9A3-214ENST00000490398 GALNTL6Q49A17 601 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms