RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PGGHGQ32M88 737 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 OR2A2Q6IF42 318 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ADNP2Q6IQ32 1131 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ABHD17CQ6PCB6 329 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 VN1R5Q7Z5H4 357 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 THOC6Q86W42 341 aaKnown RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 PALM2Q8IXS6 379 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 TAGAPQ8N103 731 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 OR2L5Q8NG80 312 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 OR1J4Q8NGS1 313 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 FIG4Q92562 907 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 FBXL8Q96CD0 374 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 HIST1H2AHQ96KK5 128 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 HIST1H2AJQ99878 128 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 H2AFJQ9BTM1 129 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 NTMT1Q9BV86 223 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ERVK-6Q9BXR3 956 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 OR2B2Q9GZK3 357 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 C12orf65Q9H3J6 166 aaKnown RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 BARX1Q9HBU1 254 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 PRDM7Q9NQW5 492 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ABHD10Q9NUJ1 306 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 IFNKQ9P0W0 207 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 SOX13Q9UN79 622 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ERVK-19Q9WJR5 959 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 PLCE1Q9P212 2302 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 IQANK1A0A1B0GTG1 560 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 A0A1W2PP18 115 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 CDC7O00311 574 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 CLOCKO15516 846 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 EMC8O43402 210 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 TCF21O43680 179 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 PEX14O75381 377 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 GUCA1CO95843 209 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 PPP3CBP16298 524 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 STIP1P31948 543 aaKnown RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 SLC1A2P43004 574 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 SLC37A1P57057 533 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 RCN2Q14257 317 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF267Q14586 743 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 OASLQ15646 514 aaKnown RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 TRIM40Q6P9F5 258 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 STAC2Q6ZMT1 411 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 RNF111Q6ZNA4 994 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 PRR22Q8IZ63 422 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 MYO1HQ8N1T3 1032 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 ZMYND19Q96E35 227 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 LINGO1Q96FE5 620 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 NDNQ99608 321 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 TRAF4Q9BUZ4 470 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 REXO4Q9GZR2 422 aaKnown RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 MANSC1Q9H8J5 431 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 COPS7BQ9H9Q2 264 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 EML4Q9HC35 981 aaKnown RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 LYRM4Q9HD34 91 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 TRMT6Q9UJA5 497 aaKnown RBP8.24□□□□□ -1.09
SSBP1-212ENST00000489378 SLC22A14Q9Y267 594 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 RNF115Q9Y4L5 304 aa8.24□□□□□ -1.09
SSBP1-212ENST00000489378 CAPN14A8MX76 684 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 HAUS5O94927 633 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 PTNP21246 168 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 TCEA1P23193 301 aaKnown RBP8.23□□□□□ -1.09
SSBP1-212ENST00000489378 PTGDSP41222 190 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 RGS4P49798 205 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 NUDT6P53370 316 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 PCDH1Q08174 1060 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF844Q08AG5 666 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 SQLEQ14534 574 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 SETDB1Q15047 1291 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 CYP1B1Q16678 543 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 HIST2H2BDQ6DRA6 164 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 LRRC8EQ6NSJ5 796 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 PAQR3Q6TCH7 311 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 TMIGD1Q6UXZ0 262 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF793Q6ZN11 406 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 ATG4DQ86TL0 474 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-212ENST00000489378 LUZP1Q86V48 1076 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 IFNEQ86WN2 208 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 RFLNBQ8N5W9 214 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 HTRA1Q92743 480 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 C11orf24Q96F05 449 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-212ENST00000489378 RBM18Q96H35 190 aaKnown RBP8.23□□□□□ -1.09
SSBP1-212ENST00000489378 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 ACTR6Q9GZN1 396 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 METTL7AQ9H8H3 244 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 GALNT9Q9HCQ5 603 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 TAS2R10Q9NYW0 307 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 DMGDHQ9UI17 866 aaKnown RBP8.23□□□□□ -1.09
SSBP1-212ENST00000489378 IKZF3Q9UKT9 509 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 KCNS2Q9ULS6 477 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 PROCRQ9UNN8 238 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 B3GALT5Q9Y2C3 310 aa8.23□□□□□ -1.09
SSBP1-212ENST00000489378 C2orf92A0A1B0GVN3 265 aa8.22□□□□□ -1.09
SSBP1-212ENST00000489378 H0YC42 278 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms