RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HYAL4Q2M3T9 481 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 EMBQ6PCB8 327 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 MYO7BQ6PIF6 2116 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 SRRM1Q8IYB3 904 aaKnown RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 EID3Q8N140 333 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 SIMC1Q8NDZ2 872 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 C17orf47Q8NEP4 570 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 OR52R1Q8NGF1 315 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 PHF10Q8WUB8 498 aaKnown RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 C11orf24Q96F05 449 aaPredicted RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 JSRP1Q96MG2 331 aaPredicted RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 DOHHQ9BU89 302 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 ITPAQ9BY32 194 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 NXF5Q9H1B4 397 aaKnown RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 LGALS13Q9UHV8 139 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 ENTPD4Q9Y227 616 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 PLLPQ9Y342 182 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 KLF2Q9Y5W3 355 aaPredicted RBP16.32■□□□□ 0.2
ITGB1-215ENST00000488494 NPFFR2Q9Y5X5 522 aa16.32■□□□□ 0.2
ITGB1-215ENST00000488494 CAPN14A8MX76 684 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 TP53I11O14683 189 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 SLU7O95391 586 aaKnown RBP16.31■□□□□ 0.2
ITGB1-215ENST00000488494 IGHG3P01860 377 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 ABCD3P28288 659 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 HTR1EP28566 365 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 SOX18P35713 384 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 HEPACAMQ14CZ8 416 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 CDSNQ15517 529 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF628Q5EBL2 1059 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 BICRALQ6AI39 1079 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 CLEC6AQ6EIG7 209 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 XKRXQ6PP77 449 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 TRILQ7L0X0 811 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 MARVELD2Q8N4S9 558 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 BANPQ8N9N5 519 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 OR9A2Q8NGT5 310 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 DIO2Q92813 273 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 CAVIN3Q969G5 261 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 CTHRC1Q96CG8 243 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF597Q96LX8 424 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 PROK2Q9HC23 129 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 ZFP64Q9NPA5 681 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 GIMAP4Q9NUV9 329 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF639Q9UID6 485 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 POLR3HQ9Y535 204 aaPredicted RBP16.31■□□□□ 0.2
ITGB1-215ENST00000488494 PTGDR2Q9Y5Y4 395 aa16.31■□□□□ 0.2
ITGB1-215ENST00000488494 NCOA6Q14686 2063 aaPredicted RBP16.31■□□□□ 0.2
ITGB1-215ENST00000488494 EXPH5Q8NEV8 1989 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 NPIPA2E9PIF3 369 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 NPIPA3F8WFD2 350 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 RSL1D1O76021 490 aaKnown RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 RFPL3SP0C7P2 107 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 UROSP10746 265 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 AGAP20933 346 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 GSTM5P46439 218 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 PLCXD2Q0VAA5 305 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 TRMT12Q53H54 448 aaKnown RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 TRIM46Q7Z4K8 759 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 SAMD14Q8IZD0 417 aaPredicted RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 SLC34A3Q8N130 599 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 SPPL2AQ8TCT8 520 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF675Q8TD23 568 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 MARVELD3Q96A59 401 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 RILPQ96NA2 401 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 FAM111AQ96PZ2 611 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 GATA5Q9BWX5 397 aaPredicted RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
ITGB1-215ENST00000488494 ANKRA2Q9H9E1 313 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 PNPLA3Q9NST1 481 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 SIRT5Q9NXA8 310 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 EHD3Q9NZN3 535 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 SLC17A7Q9P2U7 560 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 TNFRSF10DQ9UBN6 386 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 B4GALT7Q9UBV7 327 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 FIS1Q9Y3D6 152 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 HRH3Q9Y5N1 445 aa16.3■□□□□ 0.2
ITGB1-215ENST00000488494 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 ADGRG4Q8IZF6 3080 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 OR14I1A6ND48 311 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 SPAG7O75391 227 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-215ENST00000488494 EMC4Q5J8M3 183 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 TBCELQ5QJ74 424 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 CCDC116Q8IYX3 515 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 FAM9CQ8IZT9 166 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 OR5M9Q8NGP3 310 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 KAT2AQ92830 837 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 MECRQ9BV79 373 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 SLC6A15Q9H2J7 730 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 LDAHQ9H6V9 325 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 EXO5Q9H790 373 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 MYNNQ9NPC7 610 aa16.29■□□□□ 0.2
ITGB1-215ENST00000488494 MIEF1Q9NQG6 463 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms