RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CPLX4Q7Z7G2 160 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 C9orf40Q8IXQ3 194 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 TAGAPQ8N103 731 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 BEST3Q8N1M1 668 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 HORMAD2Q8N7B1 307 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 NUBPLQ8TB37 319 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 NUDT8Q8WV74 236 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 ASB15Q8WXK1 588 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 OR5P2Q8WZ92 322 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 TESCQ96BS2 214 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 ELP4Q96EB1 424 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 TMEM120AQ9BXJ8 343 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 MFRPQ9BY79 579 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 CLMPQ9H6B4 373 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 ZBTB20Q9HC78 741 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-219ENST00000488186 ZIM2Q9NZV7 527 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 MYOTQ9UBF9 498 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 SNX8Q9Y5X2 465 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 A0A087WV62 115 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 PLOD2O00469 737 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 CDK2AP1O14519 115 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 OR2J2O76002 312 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 PDGFAP04085 211 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 IL6P05231 212 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ABCB1P08183 1280 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-219ENST00000488186 S1PR1P21453 382 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 CYB561P49447 251 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ST13P50502 369 aaKnown RBP14.59□□□□□ -0.07
C9orf3-219ENST00000488186 PRKAG1P54619 331 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 NRG3P56975 720 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 IRX1P78414 480 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-219ENST00000488186 MLC1Q15049 377 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 MPEG1Q2M385 716 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 FAM174BQ3ZCQ3 159 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 CAMKMTQ7Z624 323 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 PTRH1Q86Y79 214 aaKnown RBP14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF615Q8N8J6 731 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 OR7G2Q8NG99 324 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 OR8J2Q8NGG1 315 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 C16orf52Q8NHV5 167 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 SLC22A8Q8TCC7 542 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 STON2Q8WXE9 905 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 HAS2Q92819 552 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 CTHRC1Q96CG8 243 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 WWTR1Q9GZV5 400 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 FAM107BQ9H098 131 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 RABEP2Q9H5N1 569 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ANKRA2Q9H9E1 313 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 SLAMF7Q9NQ25 335 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 SDR39U1Q9NRG7 319 aaPredicted RBP14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ANKRD10Q9NXR5 420 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF639Q9UID6 485 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 ERVK-11Q9UQG0 969 aa14.59□□□□□ -0.07
C9orf3-219ENST00000488186 PRSS51A0A1B0GVH4 220 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 GMNCA6NCL1 334 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 OR5H15A6NDH6 313 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 A8MVJ9 347 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 ANKRD28O15084 1053 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 EMC8O43402 210 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 MAN1A2O60476 641 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 CPSF4O95639 269 aaKnown RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 C6orf47O95873 294 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 CBX7O95931 251 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 CLPSP04118 112 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 LSP1P33241 339 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 FRKP42685 505 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 NR0B1P51843 470 aaKnown RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 POLR2JP52435 117 aaKnown RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 DCAF7P61962 342 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 PRR5P85299 388 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF155Q12901 538 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 KLRB1Q12918 225 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 NFATC3Q12968 1075 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 SQLEQ14534 574 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 EBPQ15125 230 aaKnown RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 ZNHIT3Q15649 155 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 SPANXN4Q5MJ08 99 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 METTL21CQ5VZV1 264 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 PAOXQ6QHF9 649 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 OPN5Q6U736 354 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 IGFL2Q6UWQ7 119 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 IGFL3Q6UXB1 125 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 C16orf47Q6ZP98 133 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 OR4A15Q8NGL6 344 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 TP53INP1Q96A56 240 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 TMEM125Q96AQ2 219 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 TEX37Q96LM6 180 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF317Q96PQ6 595 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 OR52E6Q96RD3 313 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 NPAS2Q99743 824 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 RNF32Q9H0A6 362 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 HPF1Q9NWY4 346 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 KLHL14Q9P2G3 628 aa14.58□□□□□ -0.08
C9orf3-219ENST00000488186 C19orf53Q9UNZ5 99 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 HEMK1Q9Y5R4 338 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-219ENST00000488186 CAPN14A8MX76 684 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 C9JVG2 144 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 UPK1AO00322 258 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 RNASET2O00584 256 aaKnown RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 PGRP06401 933 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms