RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 MCF2LO15068 1137 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ZNF354AO60765 605 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 PTBP3O95758 552 aaKnown RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TGFAP01135 160 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 HIST1H2AGP0C0S8 130 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 STMN1P16949 149 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 RPA1P27694 616 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 POU3F4P49335 361 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 PGFP49763 221 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 NAAAQ02083 359 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ZNF33BQ06732 778 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 FUT7Q11130 342 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 BTG3Q14201 252 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 LTB4RQ15722 352 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CDC37Q16543 378 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CARTPTQ16568 116 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ZNF699Q32M78 642 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 EIPR1Q53HC9 387 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ACER2Q5QJU3 275 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 FAM182AQ5T1J6 154 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 HIST2H2AA3Q6FI13 130 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 MFSD7Q6UXD7 560 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TMEM26Q6ZUK4 368 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CEACAM19Q7Z692 300 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TAF8Q7Z7C8 310 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 P2RY8Q86VZ1 359 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 LRRC49Q8IUZ0 686 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 FGFRL1Q8N441 504 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CHCHD4Q8N4Q1 142 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 LRRC17Q8N6Y2 441 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ZNF397Q8NF99 534 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 OR2L2Q8NH16 312 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 ZNF671Q8TAW3 534 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TMEM37Q8WXS4 190 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 PHYHIPQ92561 330 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 HIST1H2ACQ93077 130 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TOMM40LQ969M1 308 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TMEM186Q96B77 213 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 MRPL38Q96DV4 380 aaKnown RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 C1orf147Q96MC9 270 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 FOXN4Q96NZ1 517 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CBWD1Q9BRT8 395 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TTYH2Q9BSA4 534 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 SPXQ9BT56 116 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 SP140LQ9H930 580 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 CLIP2Q9UDT6 1046 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TUBGCP4Q9UGJ1 667 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 MLXQ9UH92 298 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 EMCNQ9ULC0 261 aa2.22□□□□□ -2.05
R3HDM1-219ENST00000488035 TRAV9-2A0A087WT02 112 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 A0A1W2PQ72 361 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SAP18O00422 153 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 E2F3O00716 465 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 LRRTM2O43300 516 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 RANBP6O60518 1105 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SEC22BO75396 215 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 HPP00738 406 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 IGHV3-9P01782 118 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 WNT2P09544 360 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 ETS1P14921 441 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 GAP43P17677 238 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 PRDX2P32119 198 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SAA4P35542 130 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 MATKP42679 507 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SGSHP51688 502 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 ATXN3P54252 364 aaPredicted RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 IL1RL1Q01638 556 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 ZNF85Q03923 595 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 ABRAXAS2Q15018 415 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 KARSQ15046 597 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 HAGHQ16775 308 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 C14orf28Q4W4Y0 310 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 VWA2Q5GFL6 755 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 LDLRAP1Q5SW96 308 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 LINC00242Q5T6M2 205 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 ZNF774Q6NX45 483 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 CCBE1Q6UXH8 406 aaPredicted RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 MOB2Q70IA6 237 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 LUZP1Q86V48 1076 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 HPS6Q86YV9 775 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 HIPK1Q86Z02 1210 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 NAXDQ8IW45 347 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 PYROXD2Q8N2H3 581 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 TYMSOSQ8TAI1 123 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SAMD8Q96LT4 415 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 CPXM1Q96SM3 734 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 APOOQ9BUR5 198 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 GPR174Q9BXC1 333 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 RNF41Q9H4P4 317 aaPredicted RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 CNOT2Q9NZN8 540 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 SEC14L4Q9UDX3 406 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 PLA2G4CQ9UP65 541 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 RNF24Q9Y225 148 aa2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 MRPL11Q9Y3B7 192 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-219ENST00000488035 A0A087WWV3 80 aa2.2□□□□□ -2.06
R3HDM1-219ENST00000488035 KRT87PA6NCN2 255 aa2.2□□□□□ -2.06
R3HDM1-219ENST00000488035 ARHGAP42A6NI28 874 aa2.2□□□□□ -2.06
R3HDM1-219ENST00000488035 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms