RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PI15O43692 258 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR6B1O95007 311 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 CXCL14O95715 111 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 GHRP10912 638 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 GAP43P17677 238 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 NPY2RP49146 381 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 MFAP2P55001 183 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 GMFBP60983 142 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 HERVK_113P63132 956 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 ERVK-8P63133 956 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 EIF2B1Q14232 305 aaKnown RBP3□□□□□ -1.93
HMGB1P36-201ENST00000487709 PDK1Q15118 436 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 CLPPQ16740 277 aaPredicted RBP3□□□□□ -1.93
HMGB1P36-201ENST00000487709 PARP6Q2NL67 630 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 SPINK14Q6IE38 97 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 DPY19L2P2Q6ZN68 376 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 STOX1Q6ZVD7 989 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 ADAMTSL2Q86TH1 951 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 ADCK1Q86TW2 530 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 YRDCQ86U90 279 aaKnown RBP3□□□□□ -1.93
HMGB1P36-201ENST00000487709 GPATCH11Q8N954 259 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR8H1Q8NGG4 311 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR4F5Q8NH21 305 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 SSC4DQ8WTU2 575 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 FCGR1BQ92637 280 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 C14orf79Q96F83 325 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 CAPNS2Q96L46 248 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 ERVK-6Q9BXR3 956 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 C1orf21Q9H246 121 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 RAI14Q9P0K7 980 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 EMCNQ9ULC0 261 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 DHRS7Q9Y394 339 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 FKBP7Q9Y680 259 aa3□□□□□ -1.93
HMGB1P36-201ENST00000487709 SALL1Q9NSC2 1324 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 A0A0A6YYD4 124 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF487B1APH4 448 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 GPRIN2O60269 458 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 LRP3O75074 770 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 PDE5AO76074 875 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 PRAMEF12O95522 483 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 PTMAP06454 111 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC35G4P0C7Q5 338 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 GATA1P15976 413 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 CAPN2P17655 700 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 IL4RP24394 825 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ACP1P24666 158 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC6A8P48029 635 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 GSK3BP49841 420 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TKTL1P51854 596 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SRYQ05066 204 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 PKN2Q16513 984 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF239Q16600 458 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 C14orf28Q4W4Y0 310 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 CCDC92Q53HC0 331 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ACER2Q5QJU3 275 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TAF3Q5VWG9 929 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 OLFML2AQ68BL7 652 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR6B2Q6IFH4 312 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 WDR88Q6ZMY6 472 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TIPARPQ7Z3E1 657 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 CEACAM19Q7Z692 300 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SERINC5Q86VE9 423 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ERC1Q8IUD2 1116 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 CCDC71Q8IV32 467 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 MRPL43Q8N983 215 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR52J3Q8NH60 311 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TBCKQ8TEA7 893 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TMEM186Q96B77 213 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 BIRC7Q96CA5 298 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZBED6CLQ96FA7 236 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SPATA13Q96N96 652 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 DEFB118Q96PH6 123 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 FAM111AQ96PZ2 611 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ACCSQ96QU6 501 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 KCNK16Q96T55 309 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 FAM173AQ9BQD7 235 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 NDUFAF3Q9BU61 184 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 WRAP53Q9BUR4 548 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 GPR174Q9BXC1 333 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 NMNAT2Q9BZQ4 307 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 RAB17Q9H0T7 212 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 SIRPDQ9H106 197 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 IL1RL2Q9HB29 575 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 TIGARQ9NQ88 270 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 LHX3Q9UBR4 397 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 IKZF3Q9UKT9 509 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF346Q9UL40 294 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 CSAG2Q9Y5P2 127 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 STYXL1Q9Y6J8 313 aa2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 DHX29Q7Z478 1369 aaKnown RBP2.99□□□□□ -1.93
HMGB1P36-201ENST00000487709 PCNX3Q9H6A9 2034 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 LRIT2A6NDA9 550 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 RPL37AP8A6NKH3 93 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 NPIPA2E9PIF3 369 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 C11orf98E9PRG8 122 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 LGALS8O00214 317 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 HCKP08631 526 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 H2AFZP0C0S5 128 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms