RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 LSM11P83369 360 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 IFT88Q13099 833 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PHKG1Q16816 387 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 FASTKD1Q53R41 847 aaKnown RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 AARS2Q5JTZ9 985 aaKnown RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 CTSL3PQ5NE16 218 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 HP1BP3Q5SSJ5 553 aaPredicted RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 CLEC2AQ6UVW9 174 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 C3orf62Q6ZUJ4 267 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PALM2Q8IXS6 379 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 AGGF1Q8N302 714 aaeCLIP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 ABHD11Q8NFV4 315 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 OR4K1Q8NGD4 311 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 FBF1Q8TES7 1133 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PROX1Q92786 737 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 MSI2Q96DH6 328 aaKnown RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 ZNF778Q96MU6 729 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 BIRC8Q96P09 236 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PAFAH2Q99487 392 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 OR8D2Q9GZM6 311 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PCBD2Q9H0N5 130 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 RASSF4Q9H2L5 321 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 KCNK9Q9NPC2 374 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 CCDC177Q9NQR7 707 aaPredicted RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 PRTFDC1Q9NRG1 225 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 TBK1Q9UHD2 729 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
TRIM56-204ENST00000487252 LOC100289279A0A1B0GTE1 492 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ANKRD65E5RJM6 399 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ALX3O95076 343 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 LRATO95237 230 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 VIMP08670 466 aaKnown RBP10.52□□□□□ -0.73
TRIM56-204ENST00000487252 TAC1P20366 129 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 USF1P22415 310 aaPredicted RBP10.52□□□□□ -0.73
TRIM56-204ENST00000487252 PTPN6P29350 595 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 GRK3P35626 688 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 TBPL1P62380 186 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ACTG1P63261 375 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 NTRK2Q16620 822 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ACSBG2Q5FVE4 666 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 TSTD2Q5T7W7 516 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 CCDC121Q6ZUS5 278 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 CYS1Q717R9 158 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 C10orf67Q8IYJ2 551 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ANKRD42Q8N9B4 389 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF721Q8TF20 911 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ASB11Q8WXH4 323 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 GCDHQ92947 438 aaPredicted RBP10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ALKBH8Q96BT7 664 aaKnown RBP10.52□□□□□ -0.73
TRIM56-204ENST00000487252 AICDAQ9GZX7 198 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 LRRC40Q9H9A6 602 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 PLAC1Q9HBJ0 212 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 ETNK1Q9HBU6 452 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 EIF2B3Q9NR50 452 aaKnown RBP10.52□□□□□ -0.73
TRIM56-204ENST00000487252 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 RNF112Q9ULX5 631 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 B3GALT5Q9Y2C3 310 aa10.52□□□□□ -0.73
TRIM56-204ENST00000487252 A0A1W2PP18 115 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 A0A1W2PPM1 405 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 TCRBV9S1A1TA0A576 114 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 H0Y3Z8 333 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 EMC8O43402 210 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 KIAA0513O60268 411 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 DLX3O60479 287 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 SNX4O95219 450 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 METTL18O95568 372 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 GSTA1P08263 222 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 MLNP12872 115 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 STX2P32856 288 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FDFT1P37268 417 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 MSH2P43246 934 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 NUDT6P53370 316 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 RAB8AP61006 207 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 CDK16Q00536 496 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 SLC18A2Q05940 514 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 RGS1Q08116 209 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FAPQ12884 760 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 SLC13A2Q13183 592 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 EFTUD2Q15029 972 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIM56-204ENST00000487252 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 STEAP4Q687X5 459 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 OR2A2Q6IF42 318 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 SBSNQ6UWP8 590 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 C17orf64Q86WR6 236 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 C9orf40Q8IXQ3 194 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 ANKS4BQ8N8V4 417 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF610Q8N9Z0 462 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FAM13CQ8NE31 585 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FAM83FQ8NEG4 500 aaPredicted RBP10.51□□□□□ -0.73
TRIM56-204ENST00000487252 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 C10orf105Q8TEF2 133 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FAM216AQ8WUB2 273 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 DYDC1Q8WWB3 177 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 KAT2AQ92830 837 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 SIGLEC10Q96LC7 697 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 ELAC2Q9BQ52 826 aaKnown RBP10.51□□□□□ -0.73
TRIM56-204ENST00000487252 XAB2Q9HCS7 855 aaKnown RBP10.51□□□□□ -0.73
TRIM56-204ENST00000487252 FGFR1OP2Q9NVK5 253 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms