RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 INSL5Q9Y5Q6 135 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 WNT6Q9Y6F9 365 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SCN4AP35499 1836 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 A8MUA0 341 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 HEPACAM2A8MVW5 462 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 FABP7O15540 132 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MMP20O60882 483 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 DHFRP00374 187 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 UQCRC2P22695 453 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MMP11P24347 488 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ACVR1BP36896 505 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 WDR5P61964 334 aaKnown RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 SYT14P1Q58G82 188 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SLC27A4Q6P1M0 643 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 PLEKHM3Q6ZWE6 761 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR4C15Q8NGM1 316 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SMAP2Q8WU79 429 aaPredicted RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 UCN3Q969E3 161 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 RAD51AP1Q96B01 352 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 C12orf66Q96MD2 445 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 RHBGQ9H310 441 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 FAAHO00519 579 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 RGS13O14921 159 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 REM1O75628 298 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 PAHP00439 452 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 NPPBP16860 134 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 EVI2BP34910 448 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 FABP5Q01469 135 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MLLT11Q13015 90 aaPredicted RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 SLX4IPQ5VYV7 408 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 PGBD2Q6P3X8 592 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 BHLHB9Q6PI77 547 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 NANOGP1Q8N7R0 232 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 TMEM145Q8NBT3 493 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR6T1Q8NGN1 323 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 RELTQ969Z4 430 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MAP6Q96JE9 813 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 FTSJ1Q9UET6 329 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR51B4Q9Y5P0 310 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 KIAA0100Q14667 2235 aaKnown RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 PLXNB2O15031 1838 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 A0A0G2JMP0 313 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 A0A0X1KG70 313 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 LEFTY2O00292 366 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 GNB5O14775 395 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 HOXA2O43364 376 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 GNSP15586 552 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ARSBP15848 533 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SRP9P49458 86 aaKnown RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 BNC1Q01954 994 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SUZ12Q15022 739 aaKnown RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 LY6G5CQ5SRR4 150 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 FAM27D1Q5T7N8 215 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 CHMP1BQ7LBR1 199 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 TECPR1Q7Z6L1 1165 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 IZUMO1Q8IYV9 350 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR4M2Q8NGB6 313 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 OR9A1PQ8NGU1 263 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SMPDL3AQ92484 453 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 RAD9AQ99638 391 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 SLX1AQ9BQ83 275 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MIXL1Q9H2W2 232 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 MED20Q9H944 212 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 CUEDC1Q9NWM3 386 aaPredicted RBP12.03□□□□□ -0.48
VPS52-218ENST00000482399 TAAR2Q9P1P5 351 aa12.03□□□□□ -0.48
VPS52-218ENST00000482399 ZC3H12DA2A288 527 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 EIF3FO00303 357 aaPredicted RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 FGBP02675 491 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 CD3GP09693 182 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 TYRP14679 529 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 VIPR1P32241 457 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 P2RX3P56373 397 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 FCN2Q15485 313 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 MPEG1Q2M385 716 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 METTL2BQ6P1Q9 378 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 ZER1Q7Z7L7 766 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 HMGB4Q8WW32 186 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 AKAP1Q92667 903 aaKnown RBP eCLIP12.02□□□□□ -0.49
VPS52-218ENST00000482399 TBC1D20Q96BZ9 403 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 IGSF21Q96ID5 467 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 ZNF582Q96NG8 517 aaPredicted RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 SIGLEC11Q96RL6 698 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 SPATA9Q9BWV2 254 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 TEX10Q9NXF1 929 aaPredicted RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 P2RX2Q9UBL9 471 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 EXO1Q9UQ84 846 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 NTNG1Q9Y2I2 539 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 K7ESM1 405 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms