RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PCDHA9Q9Y5H5 950 aa13.97□□□□□ -0.17
LIMS3-203ENST00000480744 DOCK7Q96N67 2140 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 C1orf226A1L170 272 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 HSPB2A8KAH6 182 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 A8MT66 165 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 PPP6CO00743 305 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 GNB5O14775 395 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 SNX4O95219 450 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 CNTFP26441 200 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ABCD3P28288 659 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 UQCRC1P31930 480 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 CRYZQ08257 329 aaKnown RBP13.96□□□□□ -0.17
LIMS3-203ENST00000480744 EXOSC7Q15024 291 aaKnown RBP13.96□□□□□ -0.17
LIMS3-203ENST00000480744 TESK1Q15569 626 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 HSPB2Q16082 182 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 SLC48A1Q6P1K1 146 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ARSKQ6UWY0 536 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ZZZ3Q8IYH5 903 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ADCY4Q8NFM4 1077 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 TRPC4APQ8TEL6 797 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 NRGNQ92686 78 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 KLHL29Q96CT2 875 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 GNRHR2Q96P88 292 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 SECISBP2Q96T21 854 aaKnown RBP13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ITPAQ9BY32 194 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 ANGPTL4Q9BY76 406 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 NXF5Q9H1B4 397 aaKnown RBP13.96□□□□□ -0.17
LIMS3-203ENST00000480744 METTL7AQ9H8H3 244 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 CAMK2AQ9UQM7 478 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 SLC6A5Q9Y345 797 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 PCDHGB3Q9Y5G1 929 aa13.96□□□□□ -0.17
LIMS3-203ENST00000480744 C2CD3Q4AC94 2353 aa13.96□□□□□ -0.18
LIMS3-203ENST00000480744 MED12Q93074 2177 aa13.96□□□□□ -0.18
LIMS3-203ENST00000480744 A0A087WUV0 522 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 AHRRA9YTQ3 701 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 KDM4EB2RXH2 506 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 PPM1BO75688 479 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 OR4F21O95013 312 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 ESRRBO95718 433 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 CSNK2A2P19784 350 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 BMP5P22003 454 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 CASP3P42574 277 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 CDK9P50750 372 aaKnown RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 GALNT1Q10472 559 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 PRICKLE4Q2TBC4 344 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 ACSF3Q4G176 576 aaPredicted RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 GLE1Q53GS7 698 aaKnown RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 EIPR1Q53HC9 387 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 FAM180BQ6P0A1 224 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 SEM1Q6ZVN7 128 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 TNIP2Q8NFZ5 429 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 TIMP4Q99727 224 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 FAIM2Q9BWQ8 316 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 PFDN4Q9NQP4 134 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 NMRK1Q9NWW6 199 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 DNAJB12Q9NXW2 375 aaKnown RBP13.95□□□□□ -0.18
LIMS3-203ENST00000480744 MAT2BQ9NZL9 334 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 TRPS1Q9UHF7 1281 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF180Q9UJW8 692 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 CES1P1Q9UKY3 287 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 PSME2Q9UL46 239 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 CFL2Q9Y281 166 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 AKAP6Q13023 2319 aa13.95□□□□□ -0.18
LIMS3-203ENST00000480744 MPDZO75970 2070 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 EXOC1LA0A1B0GW35 172 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ESPNB1AK53 854 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 DVL2O14641 736 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 HPNP05981 417 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ABCB1P08183 1280 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-203ENST00000480744 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
LIMS3-203ENST00000480744 SBK3P0C264 359 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 RHOXF2BP0C7M4 288 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 S1PR1P21453 382 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 KIR2DL3P43628 341 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ART1P52961 327 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 RIPPLY3P57055 190 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 DUSP2Q05923 314 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 PLCXD2Q0VAA5 305 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 LTB4RQ15722 352 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 WIPI1Q5MNZ9 446 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-203ENST00000480744 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-203ENST00000480744 FNDC7Q5VTL7 733 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 DESI1Q6ICB0 168 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ANGPTL8Q6UXH0 198 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 SPNS3Q6ZMD2 512 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 LACC1Q8IV20 430 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 CDYL2Q8N8U2 506 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 RELL2Q8NC24 303 aaPredicted RBP13.94□□□□□ -0.18
LIMS3-203ENST00000480744 NAXEQ8NCW5 288 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 SIMC1Q8NDZ2 872 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 C17orf47Q8NEP4 570 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 TM4SF18Q96CE8 201 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 OMA1Q96E52 524 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 LRRC46Q96FV0 321 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 TMEM41AQ96HV5 264 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 RHOXF2Q9BQY4 288 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 UBQLN3Q9H347 655 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms