RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RBMXL3Q8N7X1 1067 aaKnown RBP18.29■□□□□ 0.52
LIME1-205ENST00000480139 OR52R1Q8NGF1 315 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 RFWD2Q8NHY2 731 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 THAP3Q8WTV1 239 aaPredicted RBP18.29■□□□□ 0.52
LIME1-205ENST00000480139 OR5P2Q8WZ92 322 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 NEUROD4Q9HD90 331 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 NTMQ9P121 344 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 BCAP29Q9UHQ4 241 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 DCTN4Q9UJW0 460 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 C19orf53Q9UNZ5 99 aaPredicted RBP18.29■□□□□ 0.52
LIME1-205ENST00000480139 BOD1L1Q8NFC6 3051 aa18.29■□□□□ 0.52
LIME1-205ENST00000480139 C2orf92A0A1B0GVN3 265 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 RNASET2O00584 256 aaKnown RBP18.28■□□□□ 0.52
LIME1-205ENST00000480139 SLC22A3O75751 556 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 OR2J2O76002 312 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 PSMG1O95456 288 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 GPX3P22352 226 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 CASRP41180 1078 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 MC3RP41968 323 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 TNFSF10P50591 281 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 ATP4BP51164 291 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 TUBA3CQ13748 450 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 PGS1Q32NB8 556 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 PIGGQ5H8A4 983 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 ANXA8L1Q5VT79 327 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 CGB2Q6NT52 195 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 TUBA3EQ6PEY2 450 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 GPALPP1Q8IXQ4 340 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 MIER2Q8N344 545 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 SIMC1Q8NDZ2 872 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 NUDT8Q8WV74 236 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 ADIPOR1Q96A54 375 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 MARK4Q96L34 752 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 TEX37Q96LM6 180 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 RASL10BQ96S79 203 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 ZBTB18Q99592 522 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 UTP23Q9BRU9 249 aaKnown RBP18.28■□□□□ 0.52
LIME1-205ENST00000480139 TMEM45AQ9NWC5 275 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 FAM53CQ9NYF3 392 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 TAS2R9Q9NYW1 312 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 B3GNT3Q9Y2A9 372 aa18.28■□□□□ 0.52
LIME1-205ENST00000480139 A0A0G2JND7 137 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 UPK1AO00322 258 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 GPC1P35052 558 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 HLCSP50747 726 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 SSR4P51571 173 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 WNT3P56703 355 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 STX1BP61266 288 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 DCAF7P61962 342 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 PSPHP78330 225 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 TLR1Q15399 786 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 SPANXN4Q5MJ08 99 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 METTL21CQ5VZV1 264 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 HLA-DQA1Q5Y7H0 255 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 OR4F3Q6IEY1 312 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 TEX19Q8NA77 164 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 VPS37AQ8NEZ2 397 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 SLC22A8Q8TCC7 542 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 PNPLA2Q96AD5 504 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 THOC1Q96FV9 657 aaKnown RBP18.27■□□□□ 0.52
LIME1-205ENST00000480139 CHMP6Q96FZ7 201 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 GAL3ST4Q96RP7 486 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 DDX18Q9NVP1 670 aaKnown RBP18.27■□□□□ 0.52
LIME1-205ENST00000480139 FAM120CQ9NX05 1096 aaKnown RBP18.27■□□□□ 0.52
LIME1-205ENST00000480139 PLA2G3Q9NZ20 509 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 ANAPC2Q9UJX6 822 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 TRIM33Q9UPN9 1127 aa18.27■□□□□ 0.52
LIME1-205ENST00000480139 HEMK1Q9Y5R4 338 aaPredicted RBP18.27■□□□□ 0.52
LIME1-205ENST00000480139 PRSS51A0A1B0GVH4 220 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 WWP2O00308 870 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 SCN2BO60939 215 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 NADKO95544 446 aaPredicted RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 IL6P05231 212 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 IL12AP29459 219 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 S100A3P33764 101 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 CD96P40200 585 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 PPICP45877 212 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 CYB561P49447 251 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 CDK9P50750 372 aaKnown RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 NME5P56597 212 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 LRRC74AQ0VAA2 488 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 FAM174BQ3ZCQ3 159 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 SLC6A19Q695T7 634 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 OPN5Q6U736 354 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 TMEM64Q6YI46 380 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 C16orf47Q6ZP98 133 aaPredicted RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 DND1Q8IYX4 353 aaKnown RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 TAGAPQ8N103 731 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 TMEM156Q8N614 296 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 HORMAD2Q8N7B1 307 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 VSTM2LQ96N03 204 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 BTBD9Q96Q07 612 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 TMEM120AQ9BXJ8 343 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 ANKRA2Q9H9E1 313 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 LIN28AQ9H9Z2 209 aaKnown RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 C3orf14Q9HBI5 128 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 SIRT3Q9NTG7 399 aaPredicted RBP18.26■□□□□ 0.51
LIME1-205ENST00000480139 KLHL14Q9P2G3 628 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 DTX4Q9Y2E6 619 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 PCDHGB6Q9Y5F9 930 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms