RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 EXPH5Q8NEV8 1989 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 FCHO1O14526 889 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 PDPK1O15530 556 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 CBX7O95931 251 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 PCSK2P16519 638 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 HOXB9P17482 250 aaPredicted RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 PTPN6P29350 595 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 SSTR4P31391 388 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 POLR2JP52435 117 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 CLNS1AP54105 237 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 HBA1P69905 142 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 FUT7Q11130 342 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 MLC1Q15049 377 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 TLR1Q15399 786 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 PGS1Q32NB8 556 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 GK5Q6ZS86 529 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 MTDHQ86UE4 582 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 ANKRD46Q86W74 232 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF615Q8N8J6 731 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 TM9SF4Q92544 642 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 KAT2AQ92830 837 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 BBS4Q96RK4 519 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
CCNL1-217ENST00000476367 LUZP4Q9P127 313 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 EML6Q6ZMW3 1958 aa13.36□□□□□ -0.27
CCNL1-217ENST00000476367 FAM234BA2RU67 622 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RNASET2O00584 256 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 DPM1O60762 260 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PSMG1O95456 288 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 CDKN2CP42773 168 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 KIR3DL1P43629 444 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 NCBP2P52298 156 aaKnown RBP eCLIP13.35□□□□□ -0.276e-17■■■■■ 38.5
CCNL1-217ENST00000476367 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 KLF10Q13118 480 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RPS6KA2Q15349 733 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 AGKQ53H12 422 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 FAM9CQ8IZT9 166 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 VWA5B2Q8N398 1253 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ZADH2Q8N4Q0 377 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ANKS4BQ8N8V4 417 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 GLB1L3Q8NCI6 653 aaPredicted RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ELP4Q96EB1 424 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 INPP5KQ9BT40 448 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PLA2G3Q9NZ20 509 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 DTX4Q9Y2E6 619 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 CAPN14A8MX76 684 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 UPK1AO00322 258 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PLOD2O00469 737 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PLOD3O60568 738 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 C1QL1O75973 258 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 C6orf47O95873 294 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 NTSP30990 170 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 MPIP34949 423 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RPL3P39023 403 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 MC3RP41968 323 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 SLC37A1P57057 533 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ARG2P78540 354 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 HSPB3Q12988 150 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 EXOSC7Q15024 291 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 MEP1AQ16819 746 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 DPY19L1Q2PZI1 675 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 VPS26BQ4G0F5 336 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 TIGD2Q4W5G0 525 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PAGE3Q5JUK9 113 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 C16orf47Q6ZP98 133 aaPredicted RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RETREG3Q86VR2 466 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RPS19BP1Q86WX3 136 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 C9orf40Q8IXQ3 194 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 SAMD14Q8IZD0 417 aaPredicted RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 RBMXL3Q8N7X1 1067 aaKnown RBP13.35□□□□□ -0.27
CCNL1-217ENST00000476367 TEX19Q8NA77 164 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 GTF2H4Q92759 462 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ANKRD10Q9NXR5 420 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 STMN3Q9NZ72 180 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 SLAMF8Q9P0V8 285 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 NTMQ9P121 344 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 ARL2BPQ9Y2Y0 163 aa13.35□□□□□ -0.27
CCNL1-217ENST00000476367 PRRC2CQ9Y520 2896 aaKnown RBP13.34□□□□□ -0.27
CCNL1-217ENST00000476367 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.34□□□□□ -0.27
CCNL1-217ENST00000476367 PRSS51A0A1B0GVH4 220 aa13.34□□□□□ -0.27
CCNL1-217ENST00000476367 A0A1W2PRB8 838 aa13.34□□□□□ -0.27
CCNL1-217ENST00000476367 FBP2O00757 339 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms