RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 GALNT12Q8IXK2 581 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 VWA5B2Q8N398 1253 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 BBS10Q8TAM1 723 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 XAGE5Q8WWM1 108 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 DNAJC9Q8WXX5 260 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 LZICQ8WZA0 190 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 EME1Q96AY2 570 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 TAMM41Q96BW9 452 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 C16orf58Q96GQ5 468 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 TPD52L3Q96J77 140 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ZNF184Q99676 751 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 BDH2Q9BUT1 245 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ALOXE3Q9BYJ1 711 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ANKRA2Q9H9E1 313 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 LANCL2Q9NS86 450 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 FAM149AA5PLN7 773 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 DUXAA6NLW8 204 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CLOCKO15516 846 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 HYAL3O43820 417 aaPredicted RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 COQ9O75208 318 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 SCRG1O75711 98 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 PGM3O95394 542 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 OPN1SWP03999 348 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 HBQ1P09105 142 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CT62P0C5K7 136 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MAOAP21397 527 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MAGEA2P43356 314 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 STT3AP46977 705 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CRISP3P54108 245 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 SELENOWP63302 87 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 BTG2P78543 158 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ZFP36L1Q07352 338 aaKnown RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MGAT2Q10469 447 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MAP4K2Q12851 820 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 SYPL1Q16563 259 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 TRMT12Q53H54 448 aaKnown RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 PRAMEF8Q5VWM4 474 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 PRAMEF7Q5VXH5 474 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 PPP1R3BQ86XI6 285 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ZDHHC21Q8IVQ6 265 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ADAMTS15Q8TE58 950 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 RIT1Q92963 219 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CTHRC1Q96CG8 243 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 RBM18Q96H35 190 aaKnown RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 VPS50Q96JG6 964 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ZNF607Q96SK3 696 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 DOHHQ9BU89 302 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 ADAP2Q9NPF8 381 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 MKKSQ9NPJ1 570 aaPredicted RBP12.84□□□□□ -0.35
TRAF4-210ENST00000475329 CALML5Q9NZT1 146 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 DNAJB9Q9UBS3 223 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 LIPT1Q9Y234 373 aa12.84□□□□□ -0.35
TRAF4-210ENST00000475329 PRAMEF27A3QJZ7 478 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 SAC3D1A6NKF1 404 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 EFCAB7A8K855 629 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 M0QX08 132 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 AGRPO00253 132 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 JRKO75564 520 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CST1P01037 141 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 FABP3P05413 133 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 GALNSP34059 522 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 SOX18P35713 384 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 FUT5Q11128 374 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 IL11RAQ14626 422 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 EXOSC7Q15024 291 aaKnown RBP12.83□□□□□ -0.36
TRAF4-210ENST00000475329 TAF11Q15544 211 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 MAPK11Q15759 364 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 IFI44LQ53G44 452 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 SFT2D3Q587I9 215 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 MFSD4BQ5TF39 518 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 RBM44Q6ZP01 1051 aaKnown RBP12.83□□□□□ -0.36
TRAF4-210ENST00000475329 DGAT2L6Q6ZPD8 337 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 C16orf62Q7Z3J2 963 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 KRT73Q86Y46 540 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CDRT4Q8N9R6 151 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CLIP3Q96DZ5 547 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF578Q96N58 590 aaPredicted RBP12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CIB1Q99828 191 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 TREX2Q9BQ50 279 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms