RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 COL27A1Q8IZC6 1860 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 WDFY4Q6ZS81 3184 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 IGLV3-12A0A075B6K2 115 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 TCRBV16S1A1N1A0A5B0 115 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM149AA5PLN7 773 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 TTC36A6NLP5 189 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 CXCR6O00574 342 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ARPC2O15144 300 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC28A2O43868 658 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 PLOD3O60568 738 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 BCHEP06276 602 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 TCN2P20062 427 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ATP6V1C1P21283 382 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 PSMA4P25789 261 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 PTPN6P29350 595 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 PTGER1P34995 402 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 KRT20P35900 424 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 CRISP3P54108 245 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 CASP9P55211 416 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 POLE2P56282 527 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 IGLV3-21P80748 117 aaPredicted RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 RHAGQ02094 409 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 MAP4K2Q12851 820 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 SCARB2Q14108 478 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 KPNB1Q14974 876 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 VMACQ2NL98 169 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 PRICKLE4Q2TBC4 344 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 GPAT3Q53EU6 434 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 LRRC23Q53EV4 343 aaPredicted RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF628Q5EBL2 1059 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 GLYATQ6IB77 296 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ZCCHC12Q6PEW1 402 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM111BQ6SJ93 734 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 MED25Q71SY5 747 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 MSRB3Q8IXL7 192 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 OR2L13Q8N349 312 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 IL22RA1Q8N6P7 574 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 METTL25Q8N6Q8 603 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 COX18Q8N8Q8 333 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC38A9Q8NBW4 561 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 OR7G2Q8NG99 324 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 OR52R1Q8NGF1 315 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 FBXO30Q8TB52 745 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 XAGE5Q8WWM1 108 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 LZICQ8WZA0 190 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 TSLPQ969D9 159 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 RNF145Q96MT1 663 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF607Q96SK3 696 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 YIPF4Q9BSR8 244 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 SPATA5L1Q9BVQ7 753 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 OR8D2Q9GZM6 311 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 YY1AP1Q9H869 796 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 CXorf21Q9HAI6 301 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 Q9N2J8 555 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 THSD1Q9NS62 852 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ADPRHL2Q9NX46 363 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 RPS6KA6Q9UK32 745 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 MRTO4Q9UKD2 239 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 ANGPTL2Q9UKU9 493 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 C19orf53Q9UNZ5 99 aaPredicted RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 SAMD4AQ9UPU9 718 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 LIPT1Q9Y234 373 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 OR10H1Q9Y4A9 318 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 AK5Q9Y6K8 562 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 USP34Q70CQ2 3546 aa9.6□□□□□ -0.87
PRPF38A-202ENST00000474048 A0A1W2PS29 197 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 C21orf140B9A014 251 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 UPK1AO00322 258 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ASNA1O43681 348 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 RAD1O60671 282 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 FKBP6O75344 327 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 DKK1O94907 266 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 DLGAP3O95886 979 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ONECUT2O95948 504 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 AK1P00568 194 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 RAB40ALP0C0E4 278 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 OR12D1P0DN82 309 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 HOXB9P17482 250 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 HOXB6P17509 224 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PCGF2P35227 344 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 MSX2P35548 267 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 AP2B1P63010 937 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ELF3P78545 371 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 CDK6Q00534 326 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 DUSP2Q05923 314 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 VEZF1Q14119 521 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 EXOSC7Q15024 291 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 TRMT12Q53H54 448 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 SFT2D3Q587I9 215 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF385CQ66K41 422 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 REEP3Q6NUK4 255 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 MFSD12Q6NUT3 480 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 CDC73Q6P1J9 531 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ZFP1Q6P2D0 407 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PGM2L1Q6PCE3 622 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM199XQ6PEV8 388 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM198BQ6UWH4 519 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 CYP2R1Q6VVX0 501 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms