RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 RFTN2Q52LD8 501 aaPredicted RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 RPUSD3Q6P087 351 aaKnown RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 WDR75Q8IWA0 830 aaKnown RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 RP1L1Q8IWN7 2480 aaPredicted RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 FNDC5Q8NAU1 212 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 CLHC1Q8NHS4 586 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 FAM76AQ8TAV0 307 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 HAS2Q92819 552 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 TANKQ92844 425 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 FCRL1Q96LA6 429 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 C5orf34Q96MH7 638 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 C7orf26Q96N11 449 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 TSSK3Q96PN8 268 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 LPAR4Q99677 370 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 CCT7Q99832 543 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 TUBB6Q9BUF5 446 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 FAIM2Q9BWQ8 316 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 ALOXE3Q9BYJ1 711 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 MEAF6Q9HAF1 191 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 MYNNQ9NPC7 610 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 ADAP2Q9NPF8 381 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 PNO1Q9NRX1 252 aaKnown RBP8.5□□□□□ -1.05
SMC4-213ENST00000472282 TMED5Q9Y3A6 229 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
SMC4-213ENST00000472282 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
SMC4-213ENST00000472282 GOLGA8QA0A0J9YX86 632 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 DYTNA2CJ06 578 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 GOLGA8OA6NCC3 632 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 OR5H15A6NDH6 313 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 SAGE2PA6NJ88 616 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 A8MUI8 341 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 GOLGA8NF8WBI6 632 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 LRRTM2O43300 516 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 ERAL1O75616 437 aaKnown RBP8.49□□□□□ -1.05
SMC4-213ENST00000472282 GPR75O95800 540 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 IFNA16P05015 189 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 BCKDHAP12694 445 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 PIK3R1P27986 724 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 MAPK1P28482 360 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 DCTP40126 519 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 KCNK10P57789 538 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 SLC26A5P58743 744 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 PLIN5Q00G26 463 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 GUCY1A3Q02108 690 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 C2orf80Q0P641 193 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 SERTAD2Q14140 314 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 FAM71E1Q6IPT2 247 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 H3F3CQ6NXT2 135 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 FAM180BQ6P0A1 224 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 SLC48A1Q6P1K1 146 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 FAM180AQ6UWF9 173 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 RGS9BPQ6ZS82 235 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 MAMDC2Q7Z304 686 aaPredicted RBP8.49□□□□□ -1.05
SMC4-213ENST00000472282 MAVSQ7Z434 540 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 BEST3Q8N1M1 668 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 TMEM132CQ8N3T6 1108 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 LIX1Q8N485 282 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.052e-6■■■■■ 54.3
SMC4-213ENST00000472282 GFM2Q969S9 779 aaKnown RBP8.49□□□□□ -1.05
SMC4-213ENST00000472282 KLHL29Q96CT2 875 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 EGLN2Q96KS0 407 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 DGAT2Q96PD7 388 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 SIGLEC12Q96PQ1 595 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.49□□□□□ -1.057e-12■■■■■ 38.5
SMC4-213ENST00000472282 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 OLAHQ9NV23 265 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 ANKRD10Q9NXR5 420 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 VTI1BQ9UEU0 232 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 CES1P1Q9UKY3 287 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 USH1CQ9Y6N9 552 aa8.49□□□□□ -1.05
SMC4-213ENST00000472282 TRAV17A0A0B4J275 112 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 SYNDIG1LA6NDD5 238 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 SLCO1B7G3V0H7 640 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ZNF195O14628 629 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 AKAP10O43572 662 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ZG16O60844 167 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 DIAPH2O60879 1101 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 LRATO95237 230 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 DRD2P14416 443 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ALOX15P16050 662 aaPredicted RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 LBPP18428 481 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 DDCP20711 480 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 EPHA3P29320 983 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 NOS3P29474 1203 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 STT3AP46977 705 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ERVK-8P63133 956 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 DUSP2Q05923 314 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 MAD2L1Q13257 205 aaPredicted RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 PTGR1Q14914 329 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 HEPACAMQ14CZ8 416 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ELAVL1Q15717 326 aaKnown RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 ZNF750Q32MQ0 723 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 SLC9B1Q4ZJI4 515 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 LCE1DQ5T752 114 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 IL23RQ5VWK5 629 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms