RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ZNF675Q8TD23 568 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 CTHRC1Q96CG8 243 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 METTL2AQ96IZ6 378 aaKnown RBP13.9□□□□□ -0.18
CALD1-215ENST00000472096 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 SGCZQ96LD1 299 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 LRTM1Q9HBL6 345 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 EML4Q9HC35 981 aaKnown RBP13.9□□□□□ -0.18
CALD1-215ENST00000472096 PFDN4Q9NQP4 134 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 C1orf109Q9NX04 203 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 ZNF639Q9UID6 485 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 ENTPD4Q9Y227 616 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 DTX4Q9Y2E6 619 aa13.9□□□□□ -0.18
CALD1-215ENST00000472096 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 PINLYPA6NC86 204 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 G3V3Y1 287 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 TFECO14948 347 aaPredicted RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 SEC22BO75396 215 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 ERLIN1O75477 346 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 CBX7O95931 251 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 FGF4P08620 206 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 PCSK2P16519 638 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 NR0B1P51843 470 aaKnown RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 MRPS35P82673 323 aaKnown RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 RBPJQ06330 500 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 EXOSC7Q15024 291 aaKnown RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 KRTCAP3Q53RY4 240 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 SH2D4BQ5SQS7 431 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 C1QL3Q5VWW1 255 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 HLA-DQA1Q5Y7H0 255 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 FAM71E1Q6IPT2 247 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 Q6ZSR9 355 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 IKBIPQ70UQ0 350 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 HOMEZQ8IX15 550 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 DND1Q8IYX4 353 aaKnown RBP13.89□□□□□ -0.19
CALD1-215ENST00000472096 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 C17orf47Q8NEP4 570 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 OR2M7Q8NG81 312 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 OR6Y1Q8NGX8 325 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 ADIPOR1Q96A54 375 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 TP53INP1Q96A56 240 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 ZBTB9Q96C00 473 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 PGM2Q96G03 612 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 FCRL1Q96LA6 429 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 SH2D2AQ9NP31 389 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 SLC35C2Q9NQQ7 365 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 SACM1LQ9NTJ5 587 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 ACTL7BQ9Y614 415 aa13.89□□□□□ -0.19
CALD1-215ENST00000472096 WIPF3A6NGB9 483 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 PIP5K1BO14986 540 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 TM9SF1O15321 606 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 ASNA1O43681 348 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 LINC00032P0C843 101 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 TACR1P25103 407 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 RPL38P63173 70 aaKnown RBP13.88□□□□□ -0.19
CALD1-215ENST00000472096 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 UGT3A2Q3SY77 523 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 TRMT12Q53H54 448 aaKnown RBP13.88□□□□□ -0.19
CALD1-215ENST00000472096 GK5Q6ZS86 529 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 DDIASQ8IXT1 998 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 CCDC116Q8IYX3 515 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 FAM9CQ8IZT9 166 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 CLYBLQ8N0X4 340 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 FBXW8Q8N3Y1 598 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 SIMC1Q8NDZ2 872 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 FAM13CQ8NE31 585 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 OR52R1Q8NGF1 315 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 OR9A2Q8NGT5 310 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 AGR3Q8TD06 166 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 PAQR8Q8TEZ7 354 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 MAGED4Q96JG8 741 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 PSMG3-AS1Q96PY0 264 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 CCT7Q99832 543 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 FAM173AQ9BQD7 235 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 ITPAQ9BY32 194 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 BCAP29Q9UHQ4 241 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 EXO1Q9UQ84 846 aaKnown RBP13.88□□□□□ -0.19
CALD1-215ENST00000472096 CFL2Q9Y281 166 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 WBP11Q9Y2W2 641 aaKnown RBP13.88□□□□□ -0.19
CALD1-215ENST00000472096 TRAF6Q9Y4K3 522 aa13.88□□□□□ -0.19
CALD1-215ENST00000472096 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
CALD1-215ENST00000472096 A0A1B0GUH1 482 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
CALD1-215ENST00000472096 LRRTM2O43300 516 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 HS6ST1O60243 411 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 SLC19A2O60779 497 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 P04436 131 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 MYZAPP0CAP1 466 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 DHRS4L1P0CG22 281 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 SDC1P18827 310 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 CNR1P21554 472 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 CA7P43166 264 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 DNASE1L1P49184 302 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 HSF1Q00613 529 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
CALD1-215ENST00000472096 NTRK2Q16620 822 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms