RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NPHS2Q9NP85 383 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 SEMA4BQ9NPR2 832 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 TRPS1Q9UHF7 1281 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ERVK-19Q9WJR5 959 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 A0A1B0GVC2 190 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 GLOD5A6NK44 160 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 CAPN14A8MX76 684 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 BCKDKO14874 412 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 PGRMC2O15173 223 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 SUSD5O60279 629 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 PRKRAO75569 313 aaKnown RBP12.45□□□□□ -0.42
HMGN1-211ENST00000471260 NADKO95544 446 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-211ENST00000471260 FBXO45P0C2W1 286 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 HSD3B1P14060 373 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 COX6B1P14854 86 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 HSD3B2P26439 372 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 FOXO1Q12778 655 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 EBPQ15125 230 aaKnown RBP12.45□□□□□ -0.42
HMGN1-211ENST00000471260 CCNYL2Q5T2Q4 361 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 LYPD8Q6UX82 237 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 DGAT2L6Q6ZPD8 337 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 LURAP1LQ8IV03 231 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 SLC22A9Q8IVM8 553 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 MCEMP1Q8IX19 187 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 TAGAPQ8N103 731 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 SELENOMQ8WWX9 145 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 SLC7A6OSQ96CW6 309 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-211ENST00000471260 MRPL1Q9BYD6 325 aaKnown RBP12.45□□□□□ -0.42
HMGN1-211ENST00000471260 WWTR1Q9GZV5 400 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 DEFB127Q9H1M4 99 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 CXorf21Q9HAI6 301 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 PSME2Q9UL46 239 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 PLLPQ9Y342 182 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
HMGN1-211ENST00000471260 TEX15Q9BXT5 2789 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 DNAJC13O75165 2243 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 C1orf226A1L170 272 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 ANKRD33BA6NCL7 494 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 HRKO00198 91 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 PDE9AO76083 593 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 PDYNP01213 254 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 GBAP04062 536 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CCL3P10147 92 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CRHR1P34998 444 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 XKP51811 444 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 MAPK12P53778 367 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CDH13P55290 713 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 TRA2BP62995 288 aaKnown RBP12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CLCQ05315 142 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 FUT7Q11130 342 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 SLC10A1Q14973 349 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 NTRK2Q16620 822 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 TBCELQ5QJ74 424 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 C6orf163Q5TEZ5 329 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 LETMD1Q6P1Q0 360 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 COMMD6Q7Z4G1 85 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 GDF7Q7Z4P5 450 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 GALNT12Q8IXK2 581 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 TMEM251Q8N6I4 163 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 C17orf47Q8NEP4 570 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 OR7G1Q8NGA0 311 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CA5BP1Q8WTZ4 195 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 UTP4Q969X6 686 aaKnown RBP12.44□□□□□ -0.42
HMGN1-211ENST00000471260 GAL3ST4Q96RP7 486 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 TEX10Q9NXF1 929 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-211ENST00000471260 QPCTLQ9NXS2 382 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 SLC17A7Q9P2U7 560 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 BOKQ9UMX3 212 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-211ENST00000471260 PCDHA9Q9Y5H5 950 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
HMGN1-211ENST00000471260 ZNF407Q9C0G0 2248 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 A0A0G2JMM0 328 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 C2orf92A0A1B0GVN3 265 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 A0A1W2PPB8 328 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 A0A1W2PRS3 328 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 WASHC1A8K0Z3 465 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 KIR3DP1A8MWS1 328 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 AQP7O14520 342 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ZNHIT1O43257 154 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 HCN1O60741 890 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 GLRA3O75311 464 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 SUPT7LO94864 414 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 ANP32DO95626 131 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 KRT6AP02538 564 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 KRT6BP04259 564 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 PYGBP11216 843 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 NEFHP12036 1026 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 PRF1P14222 555 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 CPMP14384 443 aa12.43□□□□□ -0.42
HMGN1-211ENST00000471260 PORP16435 677 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms