RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 C19orf53Q9UNZ5 99 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 PTRH2Q9Y3E5 179 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 IGKV3D-11A0A0A0MRZ8 115 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 A0A1W2PS29 197 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TCRBV16S1A1N1A0A5B0 115 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 OR2W5A6NFC9 320 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TTC36A6NLP5 189 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 VSTM2BA6NLU5 285 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 A8MUA0 341 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 C9orf172C9J069 976 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 CXCR6O00574 342 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 ALOX5P09917 674 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 RAB40ALP0C0E4 278 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 NR2F1P10589 423 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TCN2P20062 427 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 PTGER1P34995 402 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 MSX2P35548 267 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 CASP9P55211 416 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 RPS26P62854 115 aaKnown RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 ELF3P78545 371 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 SCARB2Q14108 478 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 KPNB1Q14974 876 aaKnown RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 VMACQ2NL98 169 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TRMT12Q53H54 448 aaKnown RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 MTX3Q5HYI7 312 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 HLA-DQA1Q5Y7H0 255 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 GLYATQ6IB77 296 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 MRPL14Q6P1L8 145 aaKnown RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 FAM199XQ6PEV8 388 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 FAM111BQ6SJ93 734 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 RNF111Q6ZNA4 994 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TMPRSS7Q7RTY8 843 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 C16orf62Q7Z3J2 963 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 KRT73Q86Y46 540 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 SLC44A2Q8IWA5 706 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 METTL25Q8N6Q8 603 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 OR52R1Q8NGF1 315 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 SLC26A7Q8TE54 656 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 XAGE5Q8WWM1 108 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TSLPQ969D9 159 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 PMEPA1Q969W9 287 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 KIAA1143Q96AT1 154 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 ZNF583Q96ND8 569 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 LPAR4Q99677 370 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 YIPF4Q9BSR8 244 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 EFHD1Q9BUP0 239 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 OR8D2Q9GZM6 311 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 PCDHAC1Q9H158 963 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 OR51I1Q9H343 314 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 IKZF5Q9H5V7 419 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TMEM38AQ9H6F2 299 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 TRIM45Q9H8W5 580 aaPredicted RBP9.12□□□□□ -0.95
CCM2-204ENST00000470837 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 NTMQ9P121 344 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 ERVK-11Q9UQG0 969 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 ERVK-19Q9WJR5 959 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 LIPT1Q9Y234 373 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
CCM2-204ENST00000470837 C21orf140B9A014 251 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 ARPC2O15144 300 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 ASNA1O43681 348 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 SLC28A2O43868 658 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 RAD1O60671 282 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 PDE9AO76083 593 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 DLGAP3O95886 979 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 AK1P00568 194 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 GGT1P19440 569 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 PSMA4P25789 261 aaKnown RBP9.11□□□□□ -0.95
CCM2-204ENST00000470837 PCGF2P35227 344 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 CRISP3P54108 245 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 POLE2P56282 527 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 ACTR3P61158 418 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 CDK6Q00534 326 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 VEZF1Q14119 521 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 EXOSC7Q15024 291 aaKnown RBP9.11□□□□□ -0.95
CCM2-204ENST00000470837 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 GPAT3Q53EU6 434 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 SFT2D3Q587I9 215 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 COX20Q5RI15 118 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 REEP3Q6NUK4 255 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 MFSD12Q6NUT3 480 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 CDC73Q6P1J9 531 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 FAM198BQ6UWH4 519 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 SLC29A4Q7RTT9 530 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 ANKRD37Q7Z713 158 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 PTRH1Q86Y79 214 aaKnown RBP9.11□□□□□ -0.95
CCM2-204ENST00000470837 LGI4Q8N135 537 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 IL22RA1Q8N6P7 574 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 HORMAD2Q8N7B1 307 aa9.11□□□□□ -0.95
CCM2-204ENST00000470837 ENDOVQ8N8Q3 282 aaKnown RBP9.11□□□□□ -0.95
CCM2-204ENST00000470837 COX18Q8N8Q8 333 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms