RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 CHERPQ8IWX8 916 aaKnown RBP13.04□□□□□ -0.32
TOP3B-215ENST00000470338 SIMC1Q8NDZ2 872 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 ERP27Q96DN0 273 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 EGLN2Q96KS0 407 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 FAM173AQ9BQD7 235 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 CENPHQ9H3R5 247 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 GIMAP4Q9NUV9 329 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 DTX4Q9Y2E6 619 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 GLSO94925 669 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 P04436 131 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 PCSK2P16519 638 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 TACR1P25103 407 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 MPIP34949 423 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 EMDP50402 254 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 FOXO1Q12778 655 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 RFTN2Q52LD8 501 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 CMPK2Q5EBM0 449 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 Q6ZPB1 254 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 RGS9BPQ6ZS82 235 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 TICAM1Q8IUC6 712 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 GHDCQ8N2G8 530 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 CNIH4Q9P003 139 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 BCAP29Q9UHQ4 241 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 ENTPD4Q9Y227 616 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
TOP3B-215ENST00000470338 CHCHD2Q9Y6H1 151 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-215ENST00000470338 CAPN14A8MX76 684 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 G3V3Y1 287 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-215ENST00000470338 PIP5K1BO14986 540 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 HS6ST1O60243 411 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 PLOD3O60568 738 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 SLC19A2O60779 497 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 ZWINTO95229 277 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 CA7P43166 264 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 NRG3P56975 720 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 DCAF7P61962 342 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 HYAL4Q2M3T9 481 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 XKR7Q5GH72 579 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 C1QL3Q5VWW1 255 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM64Q6YI46 380 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 GK5Q6ZS86 529 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 SPPL2CQ8IUH8 684 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 FBXW8Q8N3Y1 598 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 OR52R1Q8NGF1 315 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 CDC26Q8NHZ8 85 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 KAT2AQ92830 837 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 ZBTB9Q96C00 473 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF764Q96H86 408 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-215ENST00000470338 LCORQ96JN0 433 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-215ENST00000470338 BBS4Q96RK4 519 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 CCT7Q99832 543 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 ITPAQ9BY32 194 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 TTTY12Q9BZ98 90 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 NXF5Q9H1B4 397 aaKnown RBP13.02□□□□□ -0.33
TOP3B-215ENST00000470338 ZDHHC11Q9H8X9 412 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 IL1RL2Q9HB29 575 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 PROK2Q9HC23 129 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 MIEF1Q9NQG6 463 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 PRODH2Q9UF12 536 aa13.02□□□□□ -0.33
TOP3B-215ENST00000470338 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
TOP3B-215ENST00000470338 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-215ENST00000470338 TRGV8A0A0C4DH27 118 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 ANKRD33BA6NCL7 494 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM114B3SHH9 223 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 TP53I11O14683 189 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 ITM2AO43736 263 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 TBX19O60806 448 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 SERPINE1P05121 402 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 NAGAP17050 411 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 SDC1P18827 310 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 DRD5P21918 477 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 ABCD3P28288 659 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PIGAP37287 484 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 PPICP45877 212 aa13.01□□□□□ -0.33
TOP3B-215ENST00000470338 DNASE1L1P49184 302 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms