RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 C16orf72Q14CZ0 275 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 HIST2H2ACQ16777 129 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ACSBG2Q5FVE4 666 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 IRAK1BP1Q5VVH5 260 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 HIST2H2AA3Q6FI13 130 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 NIPAL1Q6NVV3 410 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ARHGAP22Q7Z5H3 698 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ZC3HC1Q86WB0 502 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 C17orf64Q86WR6 236 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SFTPA2Q8IWL1 248 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CPNE9Q8IYJ1 553 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 EIF1ADQ8N9N8 165 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 OSR1Q8TAX0 266 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CD200R1Q8TD46 325 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 UBLCP1Q8WVY7 318 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ANKRD7Q92527 254 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 MTBPQ96DY7 904 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 RUFY1Q96T51 708 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 RBBP8Q99708 897 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SELENOSQ9BQE4 189 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CENPKQ9BS16 269 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ABHD14AQ9BUJ0 271 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 IQCGQ9H095 443 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 WWOXQ9NZC7 414 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CD274Q9NZQ7 290 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PDP2Q9P2J9 529 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PADI1Q9ULC6 663 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PLAGL1Q9UM63 463 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CDC14AQ9UNH5 594 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PLCL2Q9UPR0 1127 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ICKQ9UPZ9 632 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PCYT1BQ9Y5K3 369 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 UNC13CQ8NB66 2214 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 KNTC1P50748 2209 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 MYLKQ15746 1914 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 PLXNB3Q9ULL4 1909 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 IGHV5-51A0A0C4DH38 117 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 GOLGA6L10A6NI86 522 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CDRT15L2A8MXV6 281 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SUPT3HB4E1H0 165 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 C21orf140B9A014 251 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CLGNO14967 610 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF500O60304 480 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 RAD1O60671 282 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SRPX2O60687 465 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SUPT3HO75486 399 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 KIAA0754O94854 1291 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 GUCA1CO95843 209 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 PLAUP00749 431 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 IGHEP01854 428 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 EIF2S1P05198 315 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SLC35G6P0C7Q6 338 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 MYZAPP0CAP1 466 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CCDC166P0CW27 439 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 FGF3P11487 239 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SFTPCP11686 197 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CCL4P13236 92 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 EZRP15311 586 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 TAC1P20366 129 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 PRPH2P23942 346 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SLC26A3P40879 764 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 EIF2S3P41091 472 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 PMS2P54278 862 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 RAB10P61026 200 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 RPS15AP62244 130 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 TGM3Q08188 693 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 FASTKD3Q14CZ7 662 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 KBTBD12Q3ZCT8 623 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CEP78Q5JTW2 689 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 FIGLAQ6QHK4 219 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CROCCP2Q86T23 111 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 GPSM1Q86YR5 675 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 C2orf73Q8N5S3 287 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ENDOVQ8N8Q3 282 aaKnown RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 STAG3L4Q8TBR4 150 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 EEF1AKMT1Q8WVE0 214 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 MR1Q95460 341 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SLC41A2Q96JW4 573 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CATSPER2Q96P56 530 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF347Q96SE7 839 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 CTRCQ99895 268 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ACAT2Q9BWD1 397 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ACTR5Q9H9F9 607 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-208ENST00000469585 SMYD2Q9NRG4 433 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 OCIAD1Q9NX40 245 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 GRHL1Q9NZI5 618 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 TMEM9Q9P0T7 183 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 TAC3Q9UHF0 121 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 TMCO1Q9UM00 188 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 GTF2A1LQ9UNN4 478 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 BTRCQ9Y297 605 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 ACOT9Q9Y305 439 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 KCNE2Q9Y6J6 123 aa5.9□□□□□ -1.46
PTCD3-208ENST00000469585 PIKFYVEQ9Y2I7 2098 aa5.9□□□□□ -1.47
PTCD3-208ENST00000469585 SPTBN2O15020 2390 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 PTPRBP23467 1997 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 RP1P56715 2156 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 A0A087WV48 116 aa5.89□□□□□ -1.47
PTCD3-208ENST00000469585 NPIPB13A6NJU9 1138 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms