RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SLC24A3Q9HC58 644 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 B4GALT7Q9UBV7 327 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 SLC12A4Q9UP95 1085 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 DTX4Q9Y2E6 619 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 L3MBTL1Q9Y468 752 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 A8MT66 165 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 SYT5O00445 386 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 OTCP00480 354 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 ATP1B1P05026 303 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 GPX3P22352 226 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 GDF1P27539 372 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 ABCD3P28288 659 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 CEACAM8P31997 349 aaPredicted RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 CDK9P50750 372 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 NRG3P56975 720 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 DUSP2Q05923 314 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 UNC50Q53HI1 259 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 POMZP3Q6PJE2 187 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 TIFABQ6ZNK6 161 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 TAOK1Q7L7X3 1001 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 PRR22Q8IZ63 422 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 SIMC1Q8NDZ2 872 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 SELENOMQ8WWX9 145 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 C16orf45Q96MC5 204 aaPredicted RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF681Q96N22 645 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 MAT2BQ9NZL9 334 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 SNX6Q9UNH7 406 aa13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 PRRC2AP48634 2157 aaKnown RBP13.54□□□□□ -0.24
SDCCAG3-209ENST00000468963 ABCA4P78363 2273 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF469Q96JG9 3925 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRAPPC6AO75865 159 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 OR4F21O95013 312 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 GCAP28676 217 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TIMP3P35625 211 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 FEN1P39748 380 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TMED10P49755 219 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRA2BP62995 288 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 CLCQ05315 142 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 HSPB2Q16082 182 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRMT12Q53H54 448 aaKnown RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TIGD3Q6B0B8 471 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 VASNQ6EMK4 673 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 DESI1Q6ICB0 168 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TMEM81Q6P7N7 255 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 NUP54Q7Z3B4 507 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 VWA5B2Q8N398 1253 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 NAXEQ8NCW5 288 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 HGDQ93099 445 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 CNRIP1Q96F85 164 aaPredicted RBP13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 PRDM14Q9GZV8 571 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 NMRK1Q9NWW6 199 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TMEM216Q9P0N5 145 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRPS1Q9UHF7 1281 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 CFL2Q9Y281 166 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
SDCCAG3-209ENST00000468963 NF1P21359 2839 aa13.52□□□□□ -0.24
SDCCAG3-209ENST00000468963 HRNRQ86YZ3 2850 aaPredicted RBP13.52□□□□□ -0.24
SDCCAG3-209ENST00000468963 C15orf38-AP3S2A0A0A6YYH1 394 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 GOLGA6L10A6NI86 522 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 MANBAO00462 879 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 ERAL1O75616 437 aaKnown RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 PPM1BO75688 479 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 CBX7O95931 251 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 BMP7P18075 431 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 DRD5P21918 477 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 PTPN6P29350 595 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 PTGDSP41222 190 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 EMDP50402 254 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 RPP38P78345 283 aaKnown RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 MYBPHQ13203 477 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 EXOSC7Q15024 291 aaKnown RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 ACSF3Q4G176 576 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 EIPR1Q53HC9 387 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 ZNF678Q5SXM1 525 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 WDR53Q7Z5U6 358 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 C1orf52Q8N6N3 182 aaKnown RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 RELL2Q8NC24 303 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 MNS1Q8NEH6 495 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 ADCY4Q8NFM4 1077 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 TNIP2Q8NFZ5 429 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 HSPBAP1Q96EW2 488 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 WDYHV1Q96HA8 205 aa13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 LCORQ96JN0 433 aaPredicted RBP13.52□□□□□ -0.25
SDCCAG3-209ENST00000468963 NODALQ96S42 347 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms