RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ABCG2Q9UNQ0 655 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 PRAMEF27A3QJZ7 478 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 DUXAA6NLW8 204 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 TMEM229AB2RXF0 380 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 PLOD3O60568 738 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 RASAL1O95294 804 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ZNF883P0CG24 379 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 GRK6P43250 576 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 OR1D4P47884 311 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 MAN2A2P49641 1150 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 BTG2P78543 158 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 GPAT3Q53EU6 434 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ATAD3BQ5T9A4 648 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 FHL5Q5TD97 284 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 KRT73Q86Y46 540 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 RBM18Q96H35 190 aaKnown RBP17.76■□□□□ 0.43
SMC4-209ENST00000468653 ZNF597Q96LX8 424 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 CCDC74BQ96LY2 380 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 TREX2Q9BQ50 279 aaPredicted RBP17.76■□□□□ 0.43
SMC4-209ENST00000468653 ALOXE3Q9BYJ1 711 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 Q9H521 79 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ADAP2Q9NPF8 381 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 KCNE3Q9Y6H6 103 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 AGRPO00253 132 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 DSCR3O14972 297 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 NME6O75414 186 aaPredicted RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 E2F6O75461 281 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 SERPINB7O75635 380 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 AGR2O95994 175 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 GCGRP47871 477 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 MAPK10P53779 464 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 HSD17B7P56937 341 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 CLPPQ16740 277 aaPredicted RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 OR2T5Q6IEZ7 315 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 CDC73Q6P1J9 531 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 PIWIL3Q7Z3Z3 882 aaKnown RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 WDR53Q7Z5U6 358 aaPredicted RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 ZDHHC13Q8IUH4 622 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 ARMC8Q8IUR7 673 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 ST13P4Q8IZP2 240 aaPredicted RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 OR2T29Q8NH02 315 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 BBS10Q8TAM1 723 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.75■□□□□ 0.43
SMC4-209ENST00000468653 SLC9A6Q92581 669 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 COL21A1Q96P44 957 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 SLC7A5P2Q9GIP4 190 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 EXD2Q9NVH0 621 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 ZNF639Q9UID6 485 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 RAB26Q9ULW5 256 aa17.75■□□□□ 0.43
SMC4-209ENST00000468653 A0A1B0GX78 115 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 G3V2T6 193 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 EI24O14681 340 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 IFI6P09912 130 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 MAOAP21397 527 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SOX18P35713 384 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 IST1P53990 364 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 OTUD3Q5T2D3 398 aaPredicted RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 PHF19Q5T6S3 580 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 C16orf62Q7Z3J2 963 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 STK32CQ86UX6 486 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SVOPLQ8N434 492 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SIMC1Q8NDZ2 872 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 GEMIN6Q8WXD5 167 aaKnown RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 CNDP2Q96KP4 475 aaKnown RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 C7orf34Q96L11 122 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 DGAT2Q96PD7 388 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 RUBCNLQ9H714 662 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 ZNF304Q9HCX3 659 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 LIPT1Q9Y234 373 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 PADI2Q9Y2J8 665 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 PCDHGB2Q9Y5G2 931 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 C7orf72A4D263 438 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 TGFBR3LH3BV60 316 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 JRKO75564 520 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 DIRAS1O95057 198 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 MFN2O95140 757 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 LDOC1O95751 146 aaPredicted RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 CT62P0C5K7 136 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 TNFRSF1BP20333 461 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 FBLP22087 321 aaKnown RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 IGLV3-21P80748 117 aaPredicted RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 MGAT2Q10469 447 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 MED21Q13503 144 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 EXOSC7Q15024 291 aaKnown RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 CYP27C1Q4G0S4 372 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 PLA2G2CQ5R387 149 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 GALNT12Q8IXK2 581 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 VWA5B2Q8N398 1253 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SLC16A11Q8NCK7 471 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 OR5K1Q8NHB7 308 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 MAGEE2Q8TD90 523 aaPredicted RBP17.74■□□□□ 0.43
SMC4-209ENST00000468653 RIT1Q92963 219 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 CTHRC1Q96CG8 243 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SLC35A4Q96G79 324 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 OR6C1Q96RD1 312 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 BCL2L10Q9HD36 194 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 GIN1Q9NXP7 522 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 CALML5Q9NZT1 146 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SEC14L3Q9UDX4 400 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 SRPK3Q9UPE1 567 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms