RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DOCK7Q96N67 2140 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 CAPN14A8MX76 684 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 TRAPPC6AO75865 159 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 KRT38O76015 456 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 ABCD3P28288 659 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 CDK9P50750 372 aaKnown RBP22.4■■□□□ 1.18
PTCH1-210ENST00000468211 ACSF3Q4G176 576 aaPredicted RBP22.4■■□□□ 1.18
PTCH1-210ENST00000468211 TCHHL1Q5QJ38 904 aaPredicted RBP22.4■■□□□ 1.18
PTCH1-210ENST00000468211 C10orf62Q5T681 223 aaPredicted RBP22.4■■□□□ 1.18
PTCH1-210ENST00000468211 CES4AQ5XG92 561 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 ADCY4Q8NFM4 1077 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 OR7G1Q8NGA0 311 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 TRPC4APQ8TEL6 797 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 ZNF180Q9UJW8 692 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 C15orf41Q9Y2V0 281 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 SLC6A5Q9Y345 797 aa22.4■■□□□ 1.18
PTCH1-210ENST00000468211 ANKHD1Q8IWZ3 2542 aaKnown RBP22.4■■□□□ 1.18
PTCH1-210ENST00000468211 C1orf226A1L170 272 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ERAL1O75616 437 aaKnown RBP22.39■■□□□ 1.17
PTCH1-210ENST00000468211 OR4F21O95013 312 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 SNX4O95219 450 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 HPNP05981 417 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ABCB1P08183 1280 aaPredicted RBP22.39■■□□□ 1.17
PTCH1-210ENST00000468211 EIPR1Q53HC9 387 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 POMZP3Q6PJE2 187 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ARSKQ6UWY0 536 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 TAOK1Q7L7X3 1001 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 VWA5B2Q8N398 1253 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 C17orf47Q8NEP4 570 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 SELENOMQ8WWX9 145 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 SECISBP2Q96T21 854 aaKnown RBP22.39■■□□□ 1.17
PTCH1-210ENST00000468211 C1QTNF3Q9BXJ4 246 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ITPAQ9BY32 194 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 BRINP2Q9C0B6 783 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ZNF639Q9UID6 485 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 ITPR3Q14573 2671 aa22.39■■□□□ 1.17
PTCH1-210ENST00000468211 MPDZO75970 2070 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 GNB5O14775 395 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 EPPINO95925 133 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 OTCP00480 354 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 ATP1B1P05026 303 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 MASP1P48740 699 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 TMED10P49755 219 aaKnown RBP22.38■■□□□ 1.17
PTCH1-210ENST00000468211 NRG3P56975 720 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 MAP4K2Q12851 820 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 LTB4RQ15722 352 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 DCST1Q5T197 706 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 PACS2Q86VP3 889 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 C1orf52Q8N6N3 182 aaKnown RBP22.38■■□□□ 1.17
PTCH1-210ENST00000468211 MYRIPQ8NFW9 859 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 BCAP29Q9UHQ4 241 aa22.38■■□□□ 1.17
PTCH1-210ENST00000468211 HSPB2A8KAH6 182 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 AHRRA9YTQ3 701 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 FAM47E-STBD1D6RA91 191 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 PPM1BO75688 479 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 ZWINTO95229 277 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CBX7O95931 251 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CHN1P15882 459 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CNTFP26441 200 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 GCAP28676 217 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 DNAJA1P31689 397 aaKnown RBP22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CEACAM8P31997 349 aaPredicted RBP22.37■■□□□ 1.17
PTCH1-210ENST00000468211 HSD17B3P37058 310 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 HSPB2Q16082 182 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 TRMT12Q53H54 448 aaKnown RBP22.37■■□□□ 1.17
PTCH1-210ENST00000468211 C6orf163Q5TEZ5 329 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 VASNQ6EMK4 673 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 ZZZ3Q8IYH5 903 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 HGDQ93099 445 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CTHRC1Q96CG8 243 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 CNRIP1Q96F85 164 aaPredicted RBP22.37■■□□□ 1.17
PTCH1-210ENST00000468211 ZNF681Q96N22 645 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 NODALQ96S42 347 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 PRDM14Q9GZV8 571 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 TSPYL1Q9H0U9 437 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 BRF2Q9HAW0 419 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 HEY2Q9UBP5 337 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 TRPS1Q9UHF7 1281 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 MTORP42345 2549 aa22.37■■□□□ 1.17
PTCH1-210ENST00000468211 MAP1AP78559 2803 aaPredicted RBP22.36■■□□□ 1.17
PTCH1-210ENST00000468211 C2orf72A6NCS6 295 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 BMP7P18075 431 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 BMP5P22003 454 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 PTPN6P29350 595 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 DEKP35659 375 aaKnown RBP22.36■■□□□ 1.17
PTCH1-210ENST00000468211 PTGDSP41222 190 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 CLCQ05315 142 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 TOMM20Q15388 145 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 UNC50Q53HI1 259 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 WIPI1Q5MNZ9 446 aaPredicted RBP22.36■■□□□ 1.17
PTCH1-210ENST00000468211 TEX35Q5T0J7 233 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 TIGD3Q6B0B8 471 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 KLHL29Q96CT2 875 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 TMEM41AQ96HV5 264 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 SH3GL2Q99962 352 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 UGT2B28Q9BY64 529 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 SLC24A3Q9HC58 644 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 EHD3Q9NZN3 535 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 TMEM216Q9P0N5 145 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 SNX6Q9UNH7 406 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms