RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 BDKRB1P46663 353 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 CHMP1BQ7LBR1 199 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 MS4A15Q8N5U1 240 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 OR11H4Q8NGC9 324 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 NXPE2Q96DL1 559 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 POFUT2Q9Y2G5 429 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 CACNG2Q9Y698 323 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 EYSQ5T1H1 3165 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 A0A0A6YYJ9 748 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 MFSD2BA6NFX1 497 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 ARHGEF33A8MVX0 844 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 DHFRP00374 187 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 C8GP07360 202 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 LAMP1P11279 417 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 KIR3DL1P43629 444 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 PUDPQ08623 228 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 GPR68Q15743 365 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 UGT8Q16880 541 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 LGALSLQ3ZCW2 172 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 LRIF1Q5T3J3 769 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 LILRA6Q6PI73 481 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 BHLHB9Q6PI77 547 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 LRRC70Q7Z2Q7 622 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 CLRN3Q8NCR9 226 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 OR6C4Q8NGE1 309 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 ATOH1Q92858 354 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 HSH2DQ96JZ2 352 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 REG4Q9BYZ8 158 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 PPP1R3EQ9H7J1 279 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 PPIL1Q9Y3C6 166 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 F8W036 122 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 SGK494L7N484 410 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 CLIC1O00299 241 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 FPGTO14772 594 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 COX10Q12887 443 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 DOC2AQ14183 400 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 OR5T2Q8NGG2 359 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 ING5Q8WYH8 240 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 IRF7Q92985 503 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 MAL2Q969L2 176 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 CMTM7Q96FZ5 175 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 WBP1Q96G27 269 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 FEVQ99581 238 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 KCNJ15Q99712 375 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 NPAS1Q99742 590 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 WRAP53Q9BUR4 548 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 CPEB1Q9BZB8 566 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 CLN6Q9NWW5 311 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 NDUFB11Q9NX14 153 aa17.11■□□□□ 0.33
SNAPC3-205ENST00000467062 ISM1B1AKI9 464 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 LINC01387J3KSC0 135 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC16A8O95907 504 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 TGM6O95932 706 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 COX7A2P14406 83 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 TRIM23P36406 574 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 AKR1D1P51857 326 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 MESP2Q0VG99 397 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 MADCAM1Q13477 382 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 PLPP4Q5VZY2 271 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 SPRED2Q7Z698 418 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 THOC6Q86W42 341 aaKnown RBP17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 L3MBTL4Q8NA19 623 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 OR4K3Q96R72 315 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 MED9Q9NWA0 146 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 MAGEB17A8MXT2 336 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 HNRNPCL2B2RXH8 293 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 SAP18O00422 153 aaKnown RBP17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 MPZL2O60487 215 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 APOC1P02654 83 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 CTSAP10619 480 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 SPHARQ15513 63 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 TCF25Q9BQ70 676 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 DNMT3AQ9Y6K1 912 aaPredicted RBP17.1■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC22A23A1A5C7 686 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ABCD4O14678 606 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 CCNB2O95067 398 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 LALBAP00709 142 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 PRPS2P11908 318 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 PIPP12273 146 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ANXA8P13928 327 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 KDELR2P33947 212 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 RPL35P42766 123 aaKnown RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 CDC42P60953 191 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 CYP27C1Q4G0S4 372 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 IQCCQ4KMZ1 466 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 RASGEF1AQ8N9B8 481 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC22A8Q8TCC7 542 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ASZ1Q8WWH4 475 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 HGDQ93099 445 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SOSTQ9BQB4 213 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 KCMF1Q9P0J7 381 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms