RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 HSF2BPO75031 334 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 CSO75390 466 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 AGFG2O95081 481 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PIGRP01833 764 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RLN1P04808 185 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ELFN1P0C7U0 828 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 FCER1AP12319 257 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 NR2C1P13056 603 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 HMGB2P26583 209 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 MPIP34949 423 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PTGER4P35408 488 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RAB9AP51151 201 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PNLIPRP2P54317 469 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ATP5J2P56134 94 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ERVS71-1P61550 626 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 UFM1P61960 85 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 MRPS21P82921 87 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 IL9RQ01113 521 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 TLE1Q04724 770 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ITGADQ13349 1161 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ILKQ13418 452 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 AQP6Q13520 282 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 TRIM16LQ309B1 348 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 NDUFAF6Q330K2 333 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 GXYLT1Q4G148 440 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 EPHA10Q5JZY3 1008 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PXDC1Q5TGL8 231 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 GPR107Q5VW38 600 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RAET1LQ5VY80 246 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 CLEC18BQ6UXF7 455 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 P4HA3Q7Z4N8 544 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 TECPR1Q7Z6L1 1165 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 KMT5CQ86Y97 462 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 FAM71AQ8IYT1 594 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RNF148Q8N7C7 305 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ANKRD44Q8N8A2 993 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 CLEC18CQ8NCF0 446 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PAPD5Q8NDF8 572 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 OR4D10Q8NGI6 311 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 OR4D6Q8NGJ1 314 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 VANGL1Q8TAA9 524 aaPredicted RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PNPT1Q8TCS8 783 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RAET1EQ8TD07 263 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 SMPDL3AQ92484 453 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ABTB1Q969K4 478 aaPredicted RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ST6GALNAC6Q969X2 333 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ECHDC3Q96DC8 303 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 DGCR14Q96DF8 476 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 SNRNP40Q96DI7 357 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 THOC3Q96J01 351 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 CLPTM1LQ96KA5 538 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 C4orf36Q96KX1 117 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 SLC46A1Q96NT5 459 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 C17orf62Q9BQA9 187 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 INPP5KQ9BT40 448 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ACTR8Q9H981 624 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ZNF160Q9HCG1 818 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 KCNMB3Q9NPA1 279 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 SEMA4GQ9NTN9 838 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 RNF146Q9NTX7 359 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 HAO2Q9NYQ3 351 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ADA2Q9NZK5 511 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 CNOT2Q9NZN8 540 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 OR6C3Q9NZP0 311 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 FOXJ2Q9P0K8 574 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ABCD2Q9UBJ2 740 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 UBQLN2Q9UHD9 624 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 ADAM21Q9UKJ8 722 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 EXOGQ9Y2C4 368 aaKnown RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 UBE2J1Q9Y385 318 aaPredicted RBP5.34□□□□□ -1.55
LRCH3-212ENST00000466845 PKP3Q9Y446 797 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 FKBP7Q9Y680 259 aa5.34□□□□□ -1.55
LRCH3-212ENST00000466845 SHANK3Q9BYB0 1731 aa5.34□□□□□ -1.56
LRCH3-212ENST00000466845 PAPPAQ13219 1627 aa5.34□□□□□ -1.56
LRCH3-212ENST00000466845 CCDC195A0A1B0GUA6 201 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FBLL1A6NHQ2 334 aaKnown RBP5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FAM90A7PA6NKC0 464 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FAM90A22PA8MWA6 464 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FAM90A12PA8MX19 464 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FAM90A23PA8MXZ1 464 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 MID1O15344 667 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 HSPA12AO43301 675 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 SELENOFO60613 162 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 EIF1BO60739 113 aaKnown RBP5.33□□□□□ -1.56
LRCH3-212ENST00000466845 DPM1O60762 260 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 MED6O75586 246 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 GATBO75879 557 aaKnown RBP5.33□□□□□ -1.56
LRCH3-212ENST00000466845 GLCEO94923 617 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 WDR47O94967 919 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 GNAI3P08754 354 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 G6PDP11413 515 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 FOSL2P15408 326 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 UGT1A6P19224 532 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 TGM2P21980 687 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 MAS1LP35410 378 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 TALDO1P37837 337 aa5.33□□□□□ -1.56
LRCH3-212ENST00000466845 EIF1P41567 113 aaKnown RBP5.33□□□□□ -1.56
LRCH3-212ENST00000466845 MAGEA2P43356 314 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms