RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RELL2Q8NC24 303 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 NAXEQ8NCW5 288 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 TNIP2Q8NFZ5 429 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 TRPC4APQ8TEL6 797 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 SELENOMQ8WWX9 145 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 TIMP4Q99727 224 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 MRPL57Q9BQC6 102 aaKnown RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 TSPYL1Q9H0U9 437 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 NXF5Q9H1B4 397 aaKnown RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 MRPL46Q9H2W6 279 aaKnown RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 BCAP29Q9UHQ4 241 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
COL9A3-206ENST00000466532 CES1P1Q9UKY3 287 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 DTX4Q9Y2E6 619 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 SLC6A5Q9Y345 797 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 MED12Q93074 2177 aa17.53■□□□□ 0.4
COL9A3-206ENST00000466532 TRIM49D1C9J1S8 452 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 PPP6CO00743 305 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 DVL2O14641 736 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 OTCP00480 354 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 ABCB1P08183 1280 aaPredicted RBP17.52■□□□□ 0.4
COL9A3-206ENST00000466532 TSPAN8P19075 237 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 BMP5P22003 454 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 CNTFP26441 200 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 FEN1P39748 380 aaKnown RBP17.52■□□□□ 0.4
COL9A3-206ENST00000466532 KIR2DL3P43628 341 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 CDH13P55290 713 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 EXOSC7Q15024 291 aaKnown RBP17.52■□□□□ 0.4
COL9A3-206ENST00000466532 LETMD1Q6P1Q0 360 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 LACC1Q8IV20 430 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 PM20D2Q8IYS1 436 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 MMP21Q8N119 569 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 UHMK1Q8TAS1 419 aaKnown RBP17.52■□□□□ 0.4
COL9A3-206ENST00000466532 DCAKDQ8WVC6 231 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 IFT81Q8WYA0 676 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 TMEM41AQ96HV5 264 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 FMO2Q99518 471 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 ITPAQ9BY32 194 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 PRDM14Q9GZV8 571 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 METTL7AQ9H8H3 244 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 MAT2BQ9NZL9 334 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 SNX6Q9UNH7 406 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 CAMK2AQ9UQM7 478 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 CFL2Q9Y281 166 aa17.52■□□□□ 0.4
COL9A3-206ENST00000466532 HRNRQ86YZ3 2850 aaPredicted RBP17.52■□□□□ 0.39
COL9A3-206ENST00000466532 ANKHD1Q8IWZ3 2542 aaKnown RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 A8MT66 165 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 SYT5O00445 386 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 GNB5O14775 395 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 CTAG2O75638 210 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 PPM1BO75688 479 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 ATP1B1P05026 303 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 CSNK2A2P19784 350 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 CEACAM8P31997 349 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 PEX19P40855 299 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 ASCL1P50553 236 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 MGAT2Q10469 447 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 GALNT1Q10472 559 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 MAP4K2Q12851 820 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 WHAMMP3Q1A5X7 153 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 EIPR1Q53HC9 387 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 FAM219BQ5XKK7 198 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 VASNQ6EMK4 673 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 MMGT1Q8N4V1 131 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 TM4SF18Q96CE8 201 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 KLHL29Q96CT2 875 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 HSPBAP1Q96EW2 488 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 LRRC46Q96FV0 321 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 POLDIP3Q9BY77 421 aaKnown RBP17.51■□□□□ 0.39
COL9A3-206ENST00000466532 BRF2Q9HAW0 419 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 NMRK1Q9NWW6 199 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF180Q9UJW8 692 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 PSME2Q9UL46 239 aa17.51■□□□□ 0.39
COL9A3-206ENST00000466532 ITPR3Q14573 2671 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 MED12LQ86YW9 2145 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 CDH16O75309 829 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 OR4F21O95013 312 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 IL2RAP01589 272 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 SBK3P0C264 359 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 NAGAP17050 411 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 BMP7P18075 431 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 PTPN6P29350 595 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 TIMP3P35625 211 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 ALDH9A1P49189 494 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 DUSP2Q05923 314 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 SF3B4Q15427 424 aaKnown RBP eCLIP17.5■□□□□ 0.394e-6■■■■□ 20.7
COL9A3-206ENST00000466532 NHSL2Q5HYW2 709 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 WIPI1Q5MNZ9 446 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-206ENST00000466532 TIGD3Q6B0B8 471 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 DESI1Q6ICB0 168 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 ANGPTL8Q6UXH0 198 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 SIMC1Q8NDZ2 872 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 ADCY4Q8NFM4 1077 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 OR1J4Q8NGS1 313 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 OMA1Q96E52 524 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 LCORQ96JN0 433 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-206ENST00000466532 HBEGFQ99075 208 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms