RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CPA2P48052 419 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 EMDP50402 254 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 PGDP52209 483 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 MVDP53602 400 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 SLC37A1P57057 533 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 BNIP1Q12981 228 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 ZNF267Q14586 743 aaPredicted RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 EXOSC7Q15024 291 aaKnown RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 ATP1A1-AS1Q5TC04 95 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 SAXO2Q658L1 398 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 PLAG1Q6DJT9 500 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 UNQ6494/PRO21346Q6UXR6 183 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 NDUFAF7Q7L592 441 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CLEC4FQ8N1N0 589 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 B3GNT7Q8NFL0 401 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 OR7G1Q8NGA0 311 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 OR1N1Q8NGS0 311 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 OR5AK3PQ8NH89 298 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 DNAJB8Q8NHS0 232 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 ZFP90Q8TF47 636 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 HOXB13Q92826 284 aaPredicted RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 MOAP1Q96BY2 351 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 ROPN1LQ96C74 230 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 NEURL3Q96EH8 262 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 AURKBQ96GD4 344 aaPredicted RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 IP6K3Q96PC2 410 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CCNL2Q96S94 520 aaPredicted RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 CPPED1Q9BRF8 314 aaPredicted RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
VCP-204ENST00000466100 TUBB6Q9BUF5 446 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CNPPD1Q9BV87 410 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 NUDT9Q9BW91 350 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 SERHL2Q9H4I8 314 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 IKZF5Q9H5V7 419 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 GPATCH2Q9NW75 528 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 VPS4AQ9UN37 437 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 PIEZO2Q9H5I5 2752 aa10.37□□□□□ -0.75
VCP-204ENST00000466100 CNTRLQ7Z7A1 2325 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ZNF891A8MT65 544 aaPredicted RBP10.36□□□□□ -0.75
VCP-204ENST00000466100 TAF4O00268 1085 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 AIM2O14862 343 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 NKX2-8O15522 239 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 CELA2AP08217 269 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ESRRAP11474 423 aaPredicted RBP10.36□□□□□ -0.75
VCP-204ENST00000466100 TNNI3P19429 210 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 SOAT1P35610 550 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 MAP3K8P41279 467 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 CCT3P49368 545 aaKnown RBP10.36□□□□□ -0.75
VCP-204ENST00000466100 NUDT2P50583 147 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 Q0VFX4 171 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 CDC20Q12834 499 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 NFYCQ13952 458 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 MMEL1Q495T6 779 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 RUNDC3AQ59EK9 446 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 C6orf163Q5TEZ5 329 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ZNF621Q6ZSS3 439 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 C9orf40Q8IXQ3 194 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ZSCAN1Q8NBB4 408 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 PCYOX1LQ8NBM8 494 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 OR52R1Q8NGF1 315 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 OR56A1Q8NGH5 318 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 C16orf52Q8NHV5 167 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ELP5Q8TE02 316 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 NCLNQ969V3 563 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 LRRC58Q96CX6 371 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ART5Q96L15 291 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ANKRD27Q96NW4 1050 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 MS4A4EQ96PG1 132 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 CGREF1Q99674 301 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 SLC39A3Q9BRY0 314 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 SLC35A5Q9BS91 424 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 OR8D2Q9GZM6 311 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 OR10A5Q9H207 317 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 EFCAB1Q9HAE3 211 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ZNF160Q9HCG1 818 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 ZCCHC3Q9NUD5 404 aaKnown RBP10.36□□□□□ -0.75
VCP-204ENST00000466100 DDX18Q9NVP1 670 aaKnown RBP10.36□□□□□ -0.75
VCP-204ENST00000466100 PCDHGB4Q9UN71 923 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 DTX4Q9Y2E6 619 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 SNX8Q9Y5X2 465 aa10.36□□□□□ -0.75
VCP-204ENST00000466100 NSG1A0A0A6YYJ2 146 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 CDC14CA4D256 554 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 MASP2O00187 686 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 DYRK3O43781 588 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 PRKNO60260 465 aaPredicted RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 PRAMEF2O60811 474 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 COQ9O75208 318 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 NME6O75414 186 aaPredicted RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 BCAS2O75934 225 aaPredicted RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 UNC5CO95185 931 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 SLC6A2P23975 617 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 MAN2A2P49641 1150 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 PRR5P85299 388 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 TLE3Q04726 772 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 TP53BP2Q13625 1128 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 SELPLGQ14242 412 aa10.35□□□□□ -0.75
VCP-204ENST00000466100 CAPRIN1Q14444 709 aaKnown RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 EBPQ15125 230 aaKnown RBP10.35□□□□□ -0.75
VCP-204ENST00000466100 EXT1Q16394 746 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms