RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 NXNQ6DKJ4 435 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 SLC25A25Q6KCM7 469 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 WDR53Q7Z5U6 358 aaPredicted RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 HOMEZQ8IX15 550 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 CYP4Z2PQ8N1L4 340 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 OR7G1Q8NGA0 311 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 OR5M3Q8NGP4 307 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 PIWIL2Q8TC59 973 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 CKAP2Q8WWK9 683 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 THOC1Q96FV9 657 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 SCMH1Q96GD3 660 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 MARK4Q96L34 752 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 C5orf34Q96MH7 638 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 ITPAQ9BY32 194 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.78□□□□□ -0.68
CUX1-207ENST00000465461 HPF1Q9NWY4 346 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 TAS2R7Q9NYW3 318 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 PINLYPA6NC86 204 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 OR6C76A6NM76 312 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 C9JVG2 144 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 PDPK1O15530 556 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 RASAL1O95294 804 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 CD46P15529 392 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 HPCAL1P37235 193 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 RFC3P40938 356 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 EMDP50402 254 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 CDK9P50750 372 aaKnown RBP10.77□□□□□ -0.69
CUX1-207ENST00000465461 MAD2L1Q13257 205 aaPredicted RBP10.77□□□□□ -0.69
CUX1-207ENST00000465461 HLA-DQA1Q5Y7H0 255 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 TMEM198Q66K66 360 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 SULF2Q8IWU5 870 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 RIMKLAQ8IXN7 391 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 ZNF441Q8N8Z8 693 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 ZNF675Q8TD23 568 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 MIB2Q96AX9 1013 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 ELP4Q96EB1 424 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 C7orf26Q96N11 449 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 OR52B2Q96RD2 323 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 NXF5Q9H1B4 397 aaKnown RBP10.77□□□□□ -0.69
CUX1-207ENST00000465461 DEPPQ9NTK1 212 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 USH1CQ9Y6N9 552 aa10.77□□□□□ -0.69
CUX1-207ENST00000465461 EML6Q6ZMW3 1958 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 A0A0G2JMM0 328 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 A0A1W2PPB8 328 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 A0A1W2PRS3 328 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 KIR3DP1A8MWS1 328 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 TCP11X1B4DZS4 312 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 UPK1AO00322 258 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 NME2P1O60361 137 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 TBX19O60806 448 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 DIAPH2O60879 1101 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 NME2P22392 152 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 MST1P26927 711 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 GPC1P35052 558 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 UQCRFS1P47985 274 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 MANFP55145 182 aaKnown RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 CLDN8P56748 225 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 CORO7P57737 925 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 FBXW4P57775 412 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 UFM1P61960 85 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 FOXK1P85037 733 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 PGS1Q32NB8 556 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 ZNF791Q3KP31 576 aaPredicted RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 CPTPQ5TA50 214 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 R3HCC1LQ7Z5L2 792 aaKnown RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 SAMD14Q8IZD0 417 aaPredicted RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 CPSF7Q8N684 471 aaKnown RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 HORMAD2Q8N7B1 307 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 SLC22A8Q8TCC7 542 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 TEX37Q96LM6 180 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 MAGEB18Q96M61 343 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 EBF4Q9BQW3 602 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 TSPAN10Q9H1Z9 355 aaPredicted RBP10.76□□□□□ -0.69
CUX1-207ENST00000465461 FOLH1BQ9HBA9 442 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 ASIC5Q9NY37 505 aa10.76□□□□□ -0.69
CUX1-207ENST00000465461 A0A1W2PRB8 838 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 SLCO1B7G3V0H7 640 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 J3QKU1 62 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 ANKRD28O15084 1053 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 PEX1O43933 1283 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 PLOD3O60568 738 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 VPS4BO75351 444 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 C6orf47O95873 294 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 ABCB1P08183 1280 aaPredicted RBP10.75□□□□□ -0.69
CUX1-207ENST00000465461 CCL3P10147 92 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 PRPS1L1P21108 318 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 GNLYP22749 145 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 PIGAP37287 484 aa10.75□□□□□ -0.69
CUX1-207ENST00000465461 FRKP42685 505 aaPredicted RBP10.75□□□□□ -0.69
CUX1-207ENST00000465461 MEOX1P50221 254 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms