RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IL23RQ5VWK5 629 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 FAM71E1Q6IPT2 247 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 TICAM1Q8IUC6 712 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 LRRC25Q8N386 305 aaPredicted RBP15.76■□□□□ 0.11
VPS52-215ENST00000464425 GFM2Q969S9 779 aaKnown RBP15.76■□□□□ 0.11
VPS52-215ENST00000464425 EGLN2Q96KS0 407 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 WWTR1Q9GZV5 400 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 OR10A5Q9H207 317 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 GIMAP4Q9NUV9 329 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 MAT2BQ9NZL9 334 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 EHD3Q9NZN3 535 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 BCAP29Q9UHQ4 241 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 ENTPD4Q9Y227 616 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 TENM4Q6N022 2769 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 ESPL1Q14674 2120 aa15.76■□□□□ 0.11
VPS52-215ENST00000464425 GOLGA8QA0A0J9YX86 632 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 C2orf92A0A1B0GVN3 265 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 GOLGA8OA6NCC3 632 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 ANKUB1A6NFN9 424 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 OR6C76A6NM76 312 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 GOLGA8NF8WBI6 632 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 NME2P1O60361 137 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 DIAPH2O60879 1101 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 CRYABP02511 175 aaKnown RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 S1PR1P21453 382 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 NME2P22392 152 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 MST1P26927 711 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 IDH3AP50213 366 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 GYS2P54840 703 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 MAP4K2Q12851 820 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 EXOSC7Q15024 291 aaKnown RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 EBPQ15125 230 aaKnown RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 TRMT12Q53H54 448 aaKnown RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 HLA-DQA1Q5Y7H0 255 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 ZNF324BQ6AW86 544 aaPredicted RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 ACAD11Q709F0 780 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 FAM9CQ8IZT9 166 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 VWA5B2Q8N398 1253 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 LIX1Q8N485 282 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 ZNF615Q8N8J6 731 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 SIMC1Q8NDZ2 872 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 OR7G1Q8NGA0 311 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 OR9A2Q8NGT5 310 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 PRR7Q8TB68 274 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 CHMP6Q96FZ7 201 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 BBS4Q96RK4 519 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 CCDC28BQ9BUN5 200 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 C1orf50Q9BV19 199 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 TIMMDC1Q9NPL8 285 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 MIEF1Q9NQG6 463 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 TAS2R7Q9NYW3 318 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 BAIAP2L1Q9UHR4 511 aa15.75■□□□□ 0.11
VPS52-215ENST00000464425 EXO1Q9UQ84 846 aaKnown RBP15.75■□□□□ 0.11
VPS52-215ENST00000464425 AKAP10O43572 662 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 WISP2O76076 250 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 LRATO95237 230 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 TROVE2P10155 538 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS52-215ENST00000464425 G6PDP11413 515 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 EDN3P14138 238 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 LSP1P33241 339 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 SOX18P35713 384 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 NR0B1P51843 470 aaKnown RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 GPR85P60893 370 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 MRPS35P82673 323 aaKnown RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 ELOAQ14241 798 aaKnown RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 OPN5Q6U736 354 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 SULF2Q8IWU5 870 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 GPALPP1Q8IXQ4 340 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 SAMD14Q8IZD0 417 aaPredicted RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 CPSF7Q8N684 471 aaKnown RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 ST6GALNAC3Q8NDV1 305 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 DNAJB8Q8NHS0 232 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 CLHC1Q8NHS4 586 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 SLC22A8Q8TCC7 542 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 NR4A3Q92570 626 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 KAT2AQ92830 837 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 ZNF764Q96H86 408 aaPredicted RBP15.74■□□□□ 0.11
VPS52-215ENST00000464425 TSSK3Q96PN8 268 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 OR52B2Q96RD2 323 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 SLX1AQ9BQ83 275 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 ANKRA2Q9H9E1 313 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 NPHS2Q9NP85 383 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 TCF7L2Q9NQB0 619 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 MAPRE3Q9UPY8 281 aa15.74■□□□□ 0.11
VPS52-215ENST00000464425 POLR3GO15318 223 aaPredicted RBP15.73■□□□□ 0.11
VPS52-215ENST00000464425 PEX1O43933 1283 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 TBX19O60806 448 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 NADKO95544 446 aaPredicted RBP15.73■□□□□ 0.11
VPS52-215ENST00000464425 MPIP34949 423 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 RFC3P40938 356 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 MEOX1P50221 254 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 DIO3P55073 304 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 C21orf58P58505 322 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 DUSP8Q13202 625 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 LSM12Q3MHD2 195 aaKnown RBP15.73■□□□□ 0.11
VPS52-215ENST00000464425 ZNF628Q5EBL2 1059 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 NXNQ6DKJ4 435 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 ANKRD26P1Q6NSI1 321 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 TMEM64Q6YI46 380 aa15.73■□□□□ 0.11
VPS52-215ENST00000464425 FAM98AQ8NCA5 519 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms