RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 NR4A3Q92570 626 aa19.8■□□□□ 0.76
ABCD4-202ENST00000460308 C1orf50Q9BV19 199 aa19.8■□□□□ 0.76
ABCD4-202ENST00000460308 ACBD3Q9H3P7 528 aa19.8■□□□□ 0.76
ABCD4-202ENST00000460308 CLMPQ9H6B4 373 aa19.8■□□□□ 0.76
ABCD4-202ENST00000460308 PRRC2CQ9Y520 2896 aaKnown RBP19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ANKUB1A6NFN9 424 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 CAPN14A8MX76 684 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF354AO60765 605 aaPredicted RBP19.79■□□□□ 0.76
ABCD4-202ENST00000460308 CBX7O95931 251 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 EDN3P14138 238 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 HPCAL1P37235 193 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 RPL3P39023 403 aaKnown RBP19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ALDH6A1Q02252 535 aaKnown RBP19.79■□□□□ 0.76
ABCD4-202ENST00000460308 PRSS53Q2L4Q9 553 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ANKRD26P1Q6NSI1 321 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 SULF2Q8IWU5 870 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 DND1Q8IYX4 353 aaKnown RBP19.79■□□□□ 0.76
ABCD4-202ENST00000460308 GOLM1Q8NBJ4 401 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ST6GALNAC3Q8NDV1 305 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 PSD4Q8NDX1 1056 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 MTERF3Q96E29 417 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 NUF2Q9BZD4 464 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 AKTIPQ9H8T0 292 aa19.79■□□□□ 0.76
ABCD4-202ENST00000460308 ASPDHA6ND91 283 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 PDPK1O15530 556 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 PEX1O43933 1283 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 TBX19O60806 448 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 SLITRK5O94991 958 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 CBX6O95503 412 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 NADKO95544 446 aaPredicted RBP19.78■□□□□ 0.76
ABCD4-202ENST00000460308 P04436 131 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 GPX3P22352 226 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 UQCRFS1P47985 274 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 MEOX1P50221 254 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 DCAF7P61962 342 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 EMX2Q04743 252 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 SMU1Q2TAY7 513 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF441Q8N8Z8 693 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 C17orf47Q8NEP4 570 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 ADIPOR1Q96A54 375 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 SPACA9Q96E40 222 aaPredicted RBP19.78■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF764Q96H86 408 aaPredicted RBP19.78■□□□□ 0.76
ABCD4-202ENST00000460308 AMDHD1Q96NU7 426 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 ITPAQ9BY32 194 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 GLIPR2Q9H4G4 154 aa19.78■□□□□ 0.76
ABCD4-202ENST00000460308 NOP53Q9NZM5 478 aaKnown RBP19.78■□□□□ 0.76
ABCD4-202ENST00000460308 PLOD3O60568 738 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SNNO75324 88 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 FBXO45P0C2W1 286 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 KITP10721 976 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 GPC1P35052 558 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 GPR85P60893 370 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SRSF11Q05519 484 aaKnown RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 MRPL49Q13405 166 aaKnown RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF791Q3KP31 576 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SLC22A10Q63ZE4 541 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF324BQ6AW86 544 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 CPSF7Q8N684 471 aaKnown RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 POGLUT1Q8NBL1 392 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SIMC1Q8NDZ2 872 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 FAM13CQ8NE31 585 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZFP28Q8NHY6 868 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 DYDC1Q8WWB3 177 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZNF75CPQ92670 426 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZBED6CLQ96FA7 236 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 LCORQ96JN0 433 aaPredicted RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 PRPF18Q99633 342 aaKnown RBP19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SLX1AQ9BQ83 275 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 SACM1LQ9NTJ5 587 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 TAS2R9Q9NYW1 312 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 DTX4Q9Y2E6 619 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 NPFFR2Q9Y5X5 522 aa19.77■□□□□ 0.76
ABCD4-202ENST00000460308 ZGRF1Q86YA3 2104 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 TRPC5OSA6NMA1 111 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 SLCO1B7G3V0H7 640 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 KLF11O14901 512 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 SCAMP2O15127 329 aaKnown RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 CNR1P21554 472 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 SOX18P35713 384 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 TMED10P49755 219 aaKnown RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 EMDP50402 254 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 MANFP55145 182 aaKnown RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 DUSP8Q13202 625 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 PDE7AQ13946 482 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 PTGR1Q14914 329 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 EIF2S3LQ2VIR3 472 aaKnown RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 TMEM107Q6UX40 140 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 TMEM64Q6YI46 380 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 OR7G2Q8NG99 324 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 OR5M3Q8NGP4 307 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 PRR7Q8TB68 274 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 CIDECQ96AQ7 238 aaPredicted RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 HSPBAP1Q96EW2 488 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 MAGED4Q96JG8 741 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 FRMD6Q96NE9 622 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 ANKRA2Q9H9E1 313 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 MEAF6Q9HAF1 191 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 MARCOQ9UEW3 520 aaPredicted RBP19.76■□□□□ 0.75
ABCD4-202ENST00000460308 ATP6V1HQ9UI12 483 aa19.76■□□□□ 0.75
ABCD4-202ENST00000460308 EML6Q6ZMW3 1958 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms