RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DRD5P21918 477 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 HPCAL1P37235 193 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 PPICP45877 212 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 MEOX1P50221 254 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 WDR4P57081 412 aaKnown RBP14.92□□□□□ -0.02
CD28-203ENST00000458610 BST1Q10588 318 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
CD28-203ENST00000458610 TRMT12Q53H54 448 aaKnown RBP14.92□□□□□ -0.02
CD28-203ENST00000458610 ZNF628Q5EBL2 1059 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 FAM180BQ6P0A1 224 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 GFRALQ6UXV0 394 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 BNC2Q6ZN30 1099 aaPredicted RBP14.92□□□□□ -0.02
CD28-203ENST00000458610 GK5Q6ZS86 529 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 MDGA2Q7Z553 956 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 FAM26EQ8N5C1 309 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 ZNF441Q8N8Z8 693 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 OR52R1Q8NGF1 315 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 OR9A2Q8NGT5 310 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 C16orf52Q8NHV5 167 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 ADIPOR1Q96A54 375 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 LCORQ96JN0 433 aaPredicted RBP14.92□□□□□ -0.02
CD28-203ENST00000458610 EGLN2Q96KS0 407 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 FRMD6Q96NE9 622 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 TSSK3Q96PN8 268 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 FAM173AQ9BQD7 235 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 SH3BP4Q9P0V3 963 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 NPFFR2Q9Y5X5 522 aa14.92□□□□□ -0.02
CD28-203ENST00000458610 BOD1L1Q8NFC6 3051 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 A0A087WV62 115 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 ATP6AP2A0A1C7CYW4 349 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 SLCO1B7G3V0H7 640 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 PDPK1O15530 556 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 AKAP10O43572 662 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 ATP6AP2O75787 350 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 NADKO95544 446 aaPredicted RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 IFI6P09912 130 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 GPX3P22352 226 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 TACR1P25103 407 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 UQCRFS1P47985 274 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 EMX2Q04743 252 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 MRPL49Q13405 166 aaKnown RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 EXOSC7Q15024 291 aaKnown RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 LTB4RQ15722 352 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 EIF2S3LQ2VIR3 472 aaKnown RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 TBCELQ5QJ74 424 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 IL23RQ5VWK5 629 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 FAM47EQ6ZV65 393 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 LRRC34Q8IZ02 419 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 FAM13CQ8NE31 585 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 GFM2Q969S9 779 aaKnown RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 ZBED6CLQ96FA7 236 aaPredicted RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 SECISBP2Q96T21 854 aaKnown RBP14.91□□□□□ -0.02
CD28-203ENST00000458610 SORT1Q99523 831 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 ACBD3Q9H3P7 528 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 MANSC1Q9H8J5 431 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 ATAD3AQ9NVI7 634 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 BAIAP2L1Q9UHR4 511 aa14.91□□□□□ -0.02
CD28-203ENST00000458610 TTC36A6NLP5 189 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 HMGB1P1B2RPK0 211 aaPredicted RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 NPIPA5E9PKD4 350 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 ACOT7O00154 380 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 PLOD2O00469 737 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 LRATO95237 230 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 CBX7O95931 251 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 JUNP05412 331 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 PRPS1L1P21108 318 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 TDGF1P3P51864 188 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 CASP6P55212 293 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 MRPS35P82673 323 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 PMP22Q01453 160 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 PLGLB1Q02325 96 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 DUSP2Q05923 314 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 UBAP2LQ14157 1087 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 PDCD2Q16342 344 aaPredicted RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 NTRK2Q16620 822 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 PAOXQ6QHF9 649 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 CPSF7Q8N684 471 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 PAQR8Q8TEZ7 354 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 KAT2AQ92830 837 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 ARL8AQ96BM9 186 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 C3orf30Q96M34 536 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 GPR137Q96N19 417 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 AMDHD1Q96NU7 426 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 ZNF395Q9H8N7 513 aaPredicted RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 ACSS1Q9NUB1 689 aaPredicted RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 NOP53Q9NZM5 478 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 NPIPA1Q9UND3 350 aa14.9□□□□□ -0.02
CD28-203ENST00000458610 EXO1Q9UQ84 846 aaKnown RBP14.9□□□□□ -0.02
CD28-203ENST00000458610 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 TRPC5OSA6NMA1 111 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 TFECO14948 347 aaPredicted RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 ASNA1O43681 348 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 ZNF354AO60765 605 aaPredicted RBP14.89□□□□□ -0.03
CD28-203ENST00000458610 AGFG2O95081 481 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 UNC5CO95185 931 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 MST1P26927 711 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 GPC1P35052 558 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 KRT20P35900 424 aa14.89□□□□□ -0.03
CD28-203ENST00000458610 EMDP50402 254 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms